Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 REST-206ENST00000612429 1376 ntTSL 5 BASIC20■□□□□ 0.79
CENPAP49450 REST-207ENST00000616975 1370 ntTSL 5 BASIC20■□□□□ 0.79
CENPAP49450 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20■□□□□ 0.79
CENPAP49450 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CENPAP49450 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20■□□□□ 0.79
CENPAP49450 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20■□□□□ 0.79
CENPAP49450 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CENPAP49450 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20■□□□□ 0.79
CENPAP49450 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20■□□□□ 0.79
CENPAP49450 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20■□□□□ 0.79
CENPAP49450 AL117328.2-201ENST00000624617 1940 ntBASIC20■□□□□ 0.79
CENPAP49450 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20■□□□□ 0.79
CENPAP49450 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CENPAP49450 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20■□□□□ 0.79
CENPAP49450 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CENPAP49450 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CENPAP49450 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CENPAP49450 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CENPAP49450 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CENPAP49450 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.99■□□□□ 0.79
CENPAP49450 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CENPAP49450 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.99■□□□□ 0.79
CENPAP49450 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CENPAP49450 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CENPAP49450 AC079630.1-202ENST00000618127 1840 ntBASIC19.99■□□□□ 0.79
CENPAP49450 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.99■□□□□ 0.79
CENPAP49450 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CENPAP49450 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CENPAP49450 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CENPAP49450 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CENPAP49450 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.98■□□□□ 0.79
CENPAP49450 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CENPAP49450 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CENPAP49450 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CENPAP49450 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.98■□□□□ 0.79
CENPAP49450 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.98■□□□□ 0.79
CENPAP49450 C1orf229-201ENST00000623686 2258 ntBASIC19.98■□□□□ 0.79
CENPAP49450 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CENPAP49450 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
CENPAP49450 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CENPAP49450 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.97■□□□□ 0.79
CENPAP49450 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.97■□□□□ 0.79
CENPAP49450 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CENPAP49450 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CENPAP49450 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.97■□□□□ 0.79
CENPAP49450 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CENPAP49450 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CENPAP49450 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CENPAP49450 BX664725.1-201ENST00000438252 379 ntBASIC19.97■□□□□ 0.79
CENPAP49450 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.97■□□□□ 0.79
CENPAP49450 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.97■□□□□ 0.79
CENPAP49450 SNX5-217ENST00000606557 1087 ntBASIC19.97■□□□□ 0.79
CENPAP49450 AC137630.3-201ENST00000607245 391 ntBASIC19.97■□□□□ 0.79
CENPAP49450 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CENPAP49450 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CENPAP49450 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CENPAP49450 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CENPAP49450 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CENPAP49450 AC233723.2-201ENST00000623798 2106 ntBASIC19.96■□□□□ 0.79
CENPAP49450 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CENPAP49450 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CENPAP49450 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CENPAP49450 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CENPAP49450 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CENPAP49450 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CENPAP49450 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.96■□□□□ 0.79
CENPAP49450 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.96■□□□□ 0.79
CENPAP49450 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CENPAP49450 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CENPAP49450 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CENPAP49450 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CENPAP49450 ESRRAP2-201ENST00000418437 1549 ntBASIC19.96■□□□□ 0.79
CENPAP49450 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CENPAP49450 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CENPAP49450 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CENPAP49450 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CENPAP49450 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CENPAP49450 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CENPAP49450 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CENPAP49450 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.95■□□□□ 0.78
CENPAP49450 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CENPAP49450 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CENPAP49450 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CENPAP49450 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CENPAP49450 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CENPAP49450 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.95■□□□□ 0.78
CENPAP49450 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CENPAP49450 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CENPAP49450 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.95■□□□□ 0.78
CENPAP49450 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CENPAP49450 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CENPAP49450 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CENPAP49450 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CENPAP49450 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CENPAP49450 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.94■□□□□ 0.78
CENPAP49450 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.94■□□□□ 0.78
CENPAP49450 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CENPAP49450 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.94■□□□□ 0.78
CENPAP49450 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CENPAP49450 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms