Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GABRA4P48169 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GABRA4P48169 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
GABRA4P48169 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.18■□□□□ 0.98
GABRA4P48169 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
GABRA4P48169 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
GABRA4P48169 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
GABRA4P48169 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.17■□□□□ 0.98
GABRA4P48169 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
GABRA4P48169 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GABRA4P48169 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
GABRA4P48169 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
GABRA4P48169 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
GABRA4P48169 ANOS2P-203ENST00000472227 1816 ntBASIC21.16■□□□□ 0.98
GABRA4P48169 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
GABRA4P48169 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GABRA4P48169 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.16■□□□□ 0.98
GABRA4P48169 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.16■□□□□ 0.98
GABRA4P48169 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.16■□□□□ 0.98
GABRA4P48169 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
GABRA4P48169 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GABRA4P48169 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.16■□□□□ 0.98
GABRA4P48169 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.16■□□□□ 0.98
GABRA4P48169 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
GABRA4P48169 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.16■□□□□ 0.98
GABRA4P48169 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.15■□□□□ 0.98
GABRA4P48169 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GABRA4P48169 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.15■□□□□ 0.98
GABRA4P48169 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
GABRA4P48169 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GABRA4P48169 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GABRA4P48169 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.15■□□□□ 0.98
GABRA4P48169 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GABRA4P48169 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GABRA4P48169 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GABRA4P48169 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GABRA4P48169 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.15■□□□□ 0.98
GABRA4P48169 AC092068.2-201ENST00000590491 1708 ntBASIC21.15■□□□□ 0.98
GABRA4P48169 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
GABRA4P48169 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.14■□□□□ 0.98
GABRA4P48169 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GABRA4P48169 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
GABRA4P48169 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GABRA4P48169 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
GABRA4P48169 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
GABRA4P48169 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.13■□□□□ 0.97
GABRA4P48169 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GABRA4P48169 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GABRA4P48169 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GABRA4P48169 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.13■□□□□ 0.97
GABRA4P48169 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GABRA4P48169 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GABRA4P48169 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GABRA4P48169 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GABRA4P48169 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.13■□□□□ 0.97
GABRA4P48169 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.13■□□□□ 0.97
GABRA4P48169 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
GABRA4P48169 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GABRA4P48169 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
GABRA4P48169 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
GABRA4P48169 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GABRA4P48169 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
GABRA4P48169 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GABRA4P48169 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.12■□□□□ 0.97
GABRA4P48169 AC126544.1-201ENST00000580842 1059 ntBASIC21.12■□□□□ 0.97
GABRA4P48169 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GABRA4P48169 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GABRA4P48169 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GABRA4P48169 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.12■□□□□ 0.97
GABRA4P48169 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
GABRA4P48169 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GABRA4P48169 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GABRA4P48169 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.11■□□□□ 0.97
GABRA4P48169 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GABRA4P48169 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
GABRA4P48169 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GABRA4P48169 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.11■□□□□ 0.97
GABRA4P48169 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.11■□□□□ 0.97
GABRA4P48169 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
GABRA4P48169 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
GABRA4P48169 IRS3P-201ENST00000223076 1006 ntBASIC21.1■□□□□ 0.97
GABRA4P48169 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.1■□□□□ 0.97
GABRA4P48169 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.1■□□□□ 0.97
GABRA4P48169 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.1■□□□□ 0.97
GABRA4P48169 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GABRA4P48169 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GABRA4P48169 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GABRA4P48169 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GABRA4P48169 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
GABRA4P48169 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.09■□□□□ 0.97
GABRA4P48169 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.09■□□□□ 0.97
GABRA4P48169 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.09■□□□□ 0.97
GABRA4P48169 AC004687.1-201ENST00000579003 1625 ntBASIC21.09■□□□□ 0.97
GABRA4P48169 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
GABRA4P48169 AC026271.2-201ENST00000428091 497 ntBASIC21.09■□□□□ 0.97
GABRA4P48169 IGHV3-19-201ENST00000521488 291 ntBASIC21.09■□□□□ 0.97
GABRA4P48169 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.09■□□□□ 0.97
GABRA4P48169 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.09■□□□□ 0.97
GABRA4P48169 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.09■□□□□ 0.97
GABRA4P48169 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms