Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SOX6P35712 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SOX6P35712 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SOX6P35712 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SOX6P35712 AC073130.3-201ENST00000624389 2278 ntBASIC19.86■□□□□ 0.77
SOX6P35712 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SOX6P35712 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SOX6P35712 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SOX6P35712 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SOX6P35712 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
SOX6P35712 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SOX6P35712 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SOX6P35712 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SOX6P35712 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SOX6P35712 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SOX6P35712 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SOX6P35712 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SOX6P35712 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SOX6P35712 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SOX6P35712 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SOX6P35712 AC026310.3-201ENST00000625186 2373 ntBASIC19.85■□□□□ 0.77
SOX6P35712 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SOX6P35712 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SOX6P35712 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.85■□□□□ 0.77
SOX6P35712 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SOX6P35712 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SOX6P35712 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SOX6P35712 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.85■□□□□ 0.77
SOX6P35712 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SOX6P35712 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.85■□□□□ 0.77
SOX6P35712 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SOX6P35712 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SOX6P35712 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.84■□□□□ 0.77
SOX6P35712 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SOX6P35712 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.84■□□□□ 0.77
SOX6P35712 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SOX6P35712 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SOX6P35712 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SOX6P35712 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SOX6P35712 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.84■□□□□ 0.77
SOX6P35712 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.84■□□□□ 0.77
SOX6P35712 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.84■□□□□ 0.77
SOX6P35712 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.84■□□□□ 0.77
SOX6P35712 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SOX6P35712 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SOX6P35712 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SOX6P35712 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SOX6P35712 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.83■□□□□ 0.77
SOX6P35712 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SOX6P35712 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SOX6P35712 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.83■□□□□ 0.77
SOX6P35712 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SOX6P35712 MIR3960-201ENST00000583311 91 ntBASIC19.83■□□□□ 0.77
SOX6P35712 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SOX6P35712 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SOX6P35712 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SOX6P35712 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SOX6P35712 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SOX6P35712 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SOX6P35712 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.82■□□□□ 0.76
SOX6P35712 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SOX6P35712 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SOX6P35712 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SOX6P35712 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SOX6P35712 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SOX6P35712 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SOX6P35712 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SOX6P35712 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SOX6P35712 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.81■□□□□ 0.76
SOX6P35712 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOX6P35712 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOX6P35712 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOX6P35712 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.81■□□□□ 0.76
SOX6P35712 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SOX6P35712 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SOX6P35712 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SOX6P35712 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOX6P35712 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.81■□□□□ 0.76
SOX6P35712 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOX6P35712 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.81■□□□□ 0.76
SOX6P35712 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SOX6P35712 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOX6P35712 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SOX6P35712 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SOX6P35712 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SOX6P35712 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SOX6P35712 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
SOX6P35712 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SOX6P35712 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SOX6P35712 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.8■□□□□ 0.76
SOX6P35712 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SOX6P35712 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.8■□□□□ 0.76
SOX6P35712 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SOX6P35712 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SOX6P35712 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SOX6P35712 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SOX6P35712 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SOX6P35712 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SOX6P35712 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SOX6P35712 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms