Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
RXRBP28702 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
RXRBP28702 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC29.78■■■□□ 2.36
RXRBP28702 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC29.78■■■□□ 2.36
RXRBP28702 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC29.78■■■□□ 2.36
RXRBP28702 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
RXRBP28702 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC29.78■■■□□ 2.36
RXRBP28702 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC29.78■■■□□ 2.36
RXRBP28702 AL158047.1-201ENST00000445918 881 ntBASIC29.78■■■□□ 2.36
RXRBP28702 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
RXRBP28702 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC29.78■■■□□ 2.36
RXRBP28702 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC29.78■■■□□ 2.36
RXRBP28702 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
RXRBP28702 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.78■■■□□ 2.36
RXRBP28702 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
RXRBP28702 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC29.77■■■□□ 2.36
RXRBP28702 FAM210CP-201ENST00000445714 574 ntBASIC29.77■■■□□ 2.36
RXRBP28702 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC29.77■■■□□ 2.36
RXRBP28702 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC29.77■■■□□ 2.36
RXRBP28702 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
RXRBP28702 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
RXRBP28702 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
RXRBP28702 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
RXRBP28702 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
RXRBP28702 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
RXRBP28702 MAX-217ENST00000557277 728 ntTSL 3 BASIC29.76■■■□□ 2.35
RXRBP28702 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC29.76■■■□□ 2.35
RXRBP28702 AC105036.2-201ENST00000569468 176 ntBASIC29.76■■■□□ 2.35
RXRBP28702 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC29.76■■■□□ 2.35
RXRBP28702 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
RXRBP28702 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC29.76■■■□□ 2.35
RXRBP28702 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
RXRBP28702 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC29.75■■■□□ 2.35
RXRBP28702 RARA-203ENST00000394086 2008 ntTSL 2 BASIC29.75■■■□□ 2.35
RXRBP28702 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC29.75■■■□□ 2.35
RXRBP28702 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
RXRBP28702 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
RXRBP28702 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC29.75■■■□□ 2.35
RXRBP28702 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RXRBP28702 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
RXRBP28702 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC29.75■■■□□ 2.35
RXRBP28702 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
RXRBP28702 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC29.74■■■□□ 2.35
RXRBP28702 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC29.74■■■□□ 2.35
RXRBP28702 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
RXRBP28702 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RXRBP28702 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
RXRBP28702 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
RXRBP28702 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
RXRBP28702 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RXRBP28702 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
RXRBP28702 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC29.73■■■□□ 2.35
RXRBP28702 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC29.73■■■□□ 2.35
RXRBP28702 AC142381.4-202ENST00000563973 229 ntBASIC29.73■■■□□ 2.35
RXRBP28702 MIR4758-201ENST00000577688 71 ntBASIC29.73■■■□□ 2.35
RXRBP28702 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC29.73■■■□□ 2.35
RXRBP28702 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RXRBP28702 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
RXRBP28702 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
RXRBP28702 ECEL1P3-201ENST00000427961 737 ntBASIC29.72■■■□□ 2.35
RXRBP28702 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC29.72■■■□□ 2.35
RXRBP28702 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC29.72■■■□□ 2.35
RXRBP28702 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
RXRBP28702 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
RXRBP28702 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RXRBP28702 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC29.71■■■□□ 2.35
RXRBP28702 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC29.71■■■□□ 2.35
RXRBP28702 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC29.71■■■□□ 2.35
RXRBP28702 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC29.71■■■□□ 2.35
RXRBP28702 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC29.71■■■□□ 2.35
RXRBP28702 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
RXRBP28702 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
RXRBP28702 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC29.71■■■□□ 2.35
RXRBP28702 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
RXRBP28702 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC29.7■■■□□ 2.35
RXRBP28702 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC29.7■■■□□ 2.35
RXRBP28702 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
RXRBP28702 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
RXRBP28702 AC133552.2-202ENST00000575694 574 ntBASIC29.7■■■□□ 2.35
RXRBP28702 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
RXRBP28702 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.34
RXRBP28702 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
RXRBP28702 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
RXRBP28702 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC29.69■■■□□ 2.34
RXRBP28702 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC29.69■■■□□ 2.34
RXRBP28702 AC096887.2-201ENST00000623443 1957 ntBASIC29.69■■■□□ 2.34
RXRBP28702 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
RXRBP28702 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
RXRBP28702 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC29.68■■■□□ 2.34
RXRBP28702 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC29.68■■■□□ 2.34
RXRBP28702 AC092118.2-201ENST00000613495 667 ntBASIC29.68■■■□□ 2.34
RXRBP28702 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
RXRBP28702 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
RXRBP28702 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
RXRBP28702 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
RXRBP28702 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
RXRBP28702 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RXRBP28702 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
RXRBP28702 ADM-205ENST00000528544 586 ntTSL 2 BASIC29.67■■■□□ 2.34
RXRBP28702 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC29.67■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms