Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3BP20337 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3BP20337 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3BP20337 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.46■□□□□ 0.71
RAB3BP20337 AC018755.3-202ENST00000596210 929 ntBASIC19.46■□□□□ 0.71
RAB3BP20337 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RAB3BP20337 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.46■□□□□ 0.71
RAB3BP20337 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3BP20337 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3BP20337 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3BP20337 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3BP20337 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3BP20337 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3BP20337 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3BP20337 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3BP20337 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RAB3BP20337 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RAB3BP20337 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3BP20337 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB3BP20337 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3BP20337 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3BP20337 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3BP20337 AC080038.3-201ENST00000623346 1952 ntBASIC19.44■□□□□ 0.7
RAB3BP20337 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3BP20337 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3BP20337 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3BP20337 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RAB3BP20337 AC087393.1-201ENST00000582896 145 ntBASIC19.44■□□□□ 0.7
RAB3BP20337 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3BP20337 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RAB3BP20337 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
RAB3BP20337 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3BP20337 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3BP20337 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.44■□□□□ 0.7
RAB3BP20337 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RAB3BP20337 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB3BP20337 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.43■□□□□ 0.7
RAB3BP20337 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB3BP20337 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3BP20337 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB3BP20337 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3BP20337 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3BP20337 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3BP20337 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3BP20337 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3BP20337 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB3BP20337 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3BP20337 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3BP20337 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RAB3BP20337 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RAB3BP20337 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3BP20337 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB3BP20337 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
RAB3BP20337 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3BP20337 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB3BP20337 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3BP20337 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB3BP20337 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3BP20337 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RAB3BP20337 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3BP20337 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
RAB3BP20337 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3BP20337 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3BP20337 MIR639-201ENST00000384974 98 ntBASIC19.42■□□□□ 0.7
RAB3BP20337 AL353803.4-201ENST00000565882 1934 ntBASIC19.42■□□□□ 0.7
RAB3BP20337 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3BP20337 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB3BP20337 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3BP20337 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3BP20337 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3BP20337 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB3BP20337 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3BP20337 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3BP20337 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RAB3BP20337 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3BP20337 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3BP20337 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3BP20337 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3BP20337 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB3BP20337 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3BP20337 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3BP20337 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3BP20337 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3BP20337 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB3BP20337 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.4■□□□□ 0.7
RAB3BP20337 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB3BP20337 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
RAB3BP20337 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB3BP20337 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB3BP20337 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3BP20337 AC011551.1-201ENST00000614101 683 ntBASIC19.39■□□□□ 0.69
RAB3BP20337 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3BP20337 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3BP20337 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3BP20337 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3BP20337 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3BP20337 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB3BP20337 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RAB3BP20337 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB3BP20337 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms