Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 LINC01521-201ENST00000504184 1943 ntBASIC18.68■□□□□ 0.58
CXCL3P19876 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CXCL3P19876 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.68■□□□□ 0.58
CXCL3P19876 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.67■□□□□ 0.58
CXCL3P19876 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CXCL3P19876 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CXCL3P19876 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL3P19876 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL3P19876 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.67■□□□□ 0.58
CXCL3P19876 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL3P19876 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL3P19876 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL3P19876 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CXCL3P19876 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CXCL3P19876 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCL3P19876 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CXCL3P19876 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.66■□□□□ 0.58
CXCL3P19876 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.66■□□□□ 0.58
CXCL3P19876 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCL3P19876 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CXCL3P19876 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CXCL3P19876 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXCL3P19876 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.65■□□□□ 0.58
CXCL3P19876 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CXCL3P19876 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.65■□□□□ 0.58
CXCL3P19876 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CXCL3P19876 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXCL3P19876 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXCL3P19876 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CXCL3P19876 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXCL3P19876 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CXCL3P19876 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CXCL3P19876 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXCL3P19876 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXCL3P19876 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CXCL3P19876 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.65■□□□□ 0.58
CXCL3P19876 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CXCL3P19876 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CXCL3P19876 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCL3P19876 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
CXCL3P19876 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCL3P19876 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCL3P19876 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.64■□□□□ 0.57
CXCL3P19876 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCL3P19876 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CXCL3P19876 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.64■□□□□ 0.57
CXCL3P19876 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCL3P19876 RPS2P35-201ENST00000443417 897 ntBASIC18.64■□□□□ 0.57
CXCL3P19876 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.64■□□□□ 0.57
CXCL3P19876 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCL3P19876 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.64■□□□□ 0.57
CXCL3P19876 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCL3P19876 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.64■□□□□ 0.57
CXCL3P19876 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCL3P19876 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCL3P19876 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CXCL3P19876 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.63■□□□□ 0.57
CXCL3P19876 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCL3P19876 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCL3P19876 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CXCL3P19876 LINC01971-201ENST00000617888 1048 ntBASIC18.63■□□□□ 0.57
CXCL3P19876 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCL3P19876 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CXCL3P19876 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CXCL3P19876 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.63■□□□□ 0.57
CXCL3P19876 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CXCL3P19876 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.63■□□□□ 0.57
CXCL3P19876 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCL3P19876 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CXCL3P19876 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.62■□□□□ 0.57
CXCL3P19876 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.62■□□□□ 0.57
CXCL3P19876 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.62■□□□□ 0.57
CXCL3P19876 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCL3P19876 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCL3P19876 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCL3P19876 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCL3P19876 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CXCL3P19876 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CXCL3P19876 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCL3P19876 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCL3P19876 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCL3P19876 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCL3P19876 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CXCL3P19876 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCL3P19876 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCL3P19876 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CXCL3P19876 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
CXCL3P19876 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CXCL3P19876 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CXCL3P19876 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CXCL3P19876 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CXCL3P19876 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CXCL3P19876 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.6■□□□□ 0.57
CXCL3P19876 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CXCL3P19876 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CXCL3P19876 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CXCL3P19876 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CXCL3P19876 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CXCL3P19876 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.59■□□□□ 0.57
CXCL3P19876 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms