Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 AC241585.3-202ENST00000628937 1088 ntBASIC17.54■□□□□ 0.4
PF4V1P10720 AC245100.8-202ENST00000629247 1058 ntBASIC17.54■□□□□ 0.4
PF4V1P10720 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PF4V1P10720 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PF4V1P10720 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PF4V1P10720 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PF4V1P10720 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.54■□□□□ 0.4
PF4V1P10720 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PF4V1P10720 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PF4V1P10720 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.54■□□□□ 0.4
PF4V1P10720 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PF4V1P10720 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.53■□□□□ 0.4
PF4V1P10720 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PF4V1P10720 MIR939-201ENST00000401314 82 ntBASIC17.53■□□□□ 0.4
PF4V1P10720 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PF4V1P10720 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.53■□□□□ 0.4
PF4V1P10720 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PF4V1P10720 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PF4V1P10720 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.53■□□□□ 0.4
PF4V1P10720 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
PF4V1P10720 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PF4V1P10720 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PF4V1P10720 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PF4V1P10720 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PF4V1P10720 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PF4V1P10720 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PF4V1P10720 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PF4V1P10720 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PF4V1P10720 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PF4V1P10720 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PF4V1P10720 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PF4V1P10720 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PF4V1P10720 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PF4V1P10720 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.52■□□□□ 0.4
PF4V1P10720 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PF4V1P10720 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PF4V1P10720 AC027682.1-201ENST00000562846 899 ntBASIC17.52■□□□□ 0.4
PF4V1P10720 AL138724.1-201ENST00000606771 1088 ntBASIC17.52■□□□□ 0.4
PF4V1P10720 AC011298.3-201ENST00000615796 283 ntBASIC17.52■□□□□ 0.4
PF4V1P10720 AC009086.3-201ENST00000623486 1008 ntBASIC17.52■□□□□ 0.4
PF4V1P10720 AL136967.2-201ENST00000623968 743 ntBASIC17.52■□□□□ 0.4
PF4V1P10720 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.52■□□□□ 0.4
PF4V1P10720 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.52■□□□□ 0.4
PF4V1P10720 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PF4V1P10720 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PF4V1P10720 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PF4V1P10720 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PF4V1P10720 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PF4V1P10720 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PF4V1P10720 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.51■□□□□ 0.39
PF4V1P10720 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PF4V1P10720 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PF4V1P10720 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.51■□□□□ 0.39
PF4V1P10720 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PF4V1P10720 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PF4V1P10720 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.51■□□□□ 0.39
PF4V1P10720 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PF4V1P10720 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.51■□□□□ 0.39
PF4V1P10720 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PF4V1P10720 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PF4V1P10720 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PF4V1P10720 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PF4V1P10720 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PF4V1P10720 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PF4V1P10720 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PF4V1P10720 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PF4V1P10720 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PF4V1P10720 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.5■□□□□ 0.39
PF4V1P10720 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PF4V1P10720 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.5■□□□□ 0.39
PF4V1P10720 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.5■□□□□ 0.39
PF4V1P10720 MIR5787-201ENST00000611784 55 ntBASIC17.5■□□□□ 0.39
PF4V1P10720 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.5■□□□□ 0.39
PF4V1P10720 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.5■□□□□ 0.39
PF4V1P10720 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PF4V1P10720 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PF4V1P10720 AC144652.1-201ENST00000609974 1624 ntBASIC17.5■□□□□ 0.39
PF4V1P10720 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.5■□□□□ 0.39
PF4V1P10720 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PF4V1P10720 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PF4V1P10720 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PF4V1P10720 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.49■□□□□ 0.39
PF4V1P10720 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PF4V1P10720 AC008764.7-201ENST00000593779 1081 ntBASIC17.49■□□□□ 0.39
PF4V1P10720 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PF4V1P10720 RASA4CP-201ENST00000424092 1398 ntBASIC17.49■□□□□ 0.39
PF4V1P10720 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PF4V1P10720 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PF4V1P10720 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PF4V1P10720 AC079630.1-202ENST00000618127 1840 ntBASIC17.49■□□□□ 0.39
PF4V1P10720 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PF4V1P10720 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PF4V1P10720 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PF4V1P10720 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.48■□□□□ 0.39
PF4V1P10720 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PF4V1P10720 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PF4V1P10720 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PF4V1P10720 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.48■□□□□ 0.39
PF4V1P10720 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PF4V1P10720 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms