Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RARAP10276 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RARAP10276 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RARAP10276 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
RARAP10276 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
RARAP10276 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
RARAP10276 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RARAP10276 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.34■■□□□ 1.33
RARAP10276 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.34■■□□□ 1.33
RARAP10276 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
RARAP10276 UNC93B8-201ENST00000511903 705 ntBASIC23.34■■□□□ 1.33
RARAP10276 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.34■■□□□ 1.33
RARAP10276 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RARAP10276 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RARAP10276 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.34■■□□□ 1.33
RARAP10276 ECEL1P1-201ENST00000373592 1742 ntBASIC23.33■■□□□ 1.33
RARAP10276 AL353803.4-201ENST00000565882 1934 ntBASIC23.33■■□□□ 1.33
RARAP10276 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
RARAP10276 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RARAP10276 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RARAP10276 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
RARAP10276 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.33■■□□□ 1.32
RARAP10276 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
RARAP10276 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RARAP10276 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
RARAP10276 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.32■■□□□ 1.32
RARAP10276 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RARAP10276 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.32■■□□□ 1.32
RARAP10276 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.31■■□□□ 1.32
RARAP10276 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
RARAP10276 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
RARAP10276 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RARAP10276 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.31■■□□□ 1.32
RARAP10276 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RARAP10276 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
RARAP10276 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RARAP10276 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.3■■□□□ 1.32
RARAP10276 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RARAP10276 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RARAP10276 AC144652.1-201ENST00000609974 1624 ntBASIC23.3■■□□□ 1.32
RARAP10276 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RARAP10276 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.3■■□□□ 1.32
RARAP10276 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RARAP10276 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.3■■□□□ 1.32
RARAP10276 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.29■■□□□ 1.32
RARAP10276 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RARAP10276 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RARAP10276 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RARAP10276 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RARAP10276 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RARAP10276 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
RARAP10276 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.29■■□□□ 1.32
RARAP10276 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.29■■□□□ 1.32
RARAP10276 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RARAP10276 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
RARAP10276 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RARAP10276 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RARAP10276 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.29■■□□□ 1.32
RARAP10276 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RARAP10276 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
RARAP10276 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
RARAP10276 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RARAP10276 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.28■■□□□ 1.32
RARAP10276 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.28■■□□□ 1.32
RARAP10276 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.27■■□□□ 1.32
RARAP10276 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RARAP10276 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RARAP10276 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.27■■□□□ 1.32
RARAP10276 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RARAP10276 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RARAP10276 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.27■■□□□ 1.32
RARAP10276 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.27■■□□□ 1.32
RARAP10276 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RARAP10276 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RARAP10276 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RARAP10276 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.26■■□□□ 1.31
RARAP10276 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
RARAP10276 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.26■■□□□ 1.31
RARAP10276 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.26■■□□□ 1.31
RARAP10276 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
RARAP10276 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.26■■□□□ 1.31
RARAP10276 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RARAP10276 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RARAP10276 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
RARAP10276 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
RARAP10276 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RARAP10276 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RARAP10276 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RARAP10276 AC009102.2-201ENST00000606772 1639 ntBASIC23.26■■□□□ 1.31
RARAP10276 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RARAP10276 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RARAP10276 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.25■■□□□ 1.31
RARAP10276 ESRRAP2-201ENST00000418437 1549 ntBASIC23.25■■□□□ 1.31
RARAP10276 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.25■■□□□ 1.31
RARAP10276 GUSBP5-201ENST00000418136 578 ntBASIC23.25■■□□□ 1.31
RARAP10276 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RARAP10276 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
RARAP10276 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.25■■□□□ 1.31
RARAP10276 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.25■■□□□ 1.31
RARAP10276 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms