Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB40ALP0C0E4 AL162430.1-201ENST00000480705 870 ntBASIC20.96■□□□□ 0.95
RAB40ALP0C0E4 AL358852.1-201ENST00000623174 1268 ntBASIC20.96■□□□□ 0.95
RAB40ALP0C0E4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.96■□□□□ 0.95
RAB40ALP0C0E4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAB40ALP0C0E4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB40ALP0C0E4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
RAB40ALP0C0E4 LINC01529-204ENST00000636474 1715 ntBASIC20.95■□□□□ 0.94
RAB40ALP0C0E4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB40ALP0C0E4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RAB40ALP0C0E4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB40ALP0C0E4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB40ALP0C0E4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB40ALP0C0E4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB40ALP0C0E4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.95■□□□□ 0.94
RAB40ALP0C0E4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.95■□□□□ 0.94
RAB40ALP0C0E4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAB40ALP0C0E4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAB40ALP0C0E4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB40ALP0C0E4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAB40ALP0C0E4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.95■□□□□ 0.94
RAB40ALP0C0E4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB40ALP0C0E4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB40ALP0C0E4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB40ALP0C0E4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RAB40ALP0C0E4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB40ALP0C0E4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.94■□□□□ 0.94
RAB40ALP0C0E4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RAB40ALP0C0E4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB40ALP0C0E4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB40ALP0C0E4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB40ALP0C0E4 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.94■□□□□ 0.94
RAB40ALP0C0E4 MIR572-201ENST00000384983 95 ntBASIC20.94■□□□□ 0.94
RAB40ALP0C0E4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB40ALP0C0E4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RAB40ALP0C0E4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.94■□□□□ 0.94
RAB40ALP0C0E4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RAB40ALP0C0E4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.94■□□□□ 0.94
RAB40ALP0C0E4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.94■□□□□ 0.94
RAB40ALP0C0E4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB40ALP0C0E4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB40ALP0C0E4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAB40ALP0C0E4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAB40ALP0C0E4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAB40ALP0C0E4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB40ALP0C0E4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
RAB40ALP0C0E4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB40ALP0C0E4 YBX1P1-201ENST00000445822 960 ntBASIC20.93■□□□□ 0.94
RAB40ALP0C0E4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB40ALP0C0E4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB40ALP0C0E4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
RAB40ALP0C0E4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.93■□□□□ 0.94
RAB40ALP0C0E4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB40ALP0C0E4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.93■□□□□ 0.94
RAB40ALP0C0E4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.93■□□□□ 0.94
RAB40ALP0C0E4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40ALP0C0E4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB40ALP0C0E4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB40ALP0C0E4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RAB40ALP0C0E4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB40ALP0C0E4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.91■□□□□ 0.94
RAB40ALP0C0E4 AC034268.1-201ENST00000441047 882 ntBASIC20.91■□□□□ 0.94
RAB40ALP0C0E4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.91■□□□□ 0.94
RAB40ALP0C0E4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB40ALP0C0E4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAB40ALP0C0E4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
RAB40ALP0C0E4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.91■□□□□ 0.94
RAB40ALP0C0E4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.91■□□□□ 0.94
RAB40ALP0C0E4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB40ALP0C0E4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RAB40ALP0C0E4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB40ALP0C0E4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
RAB40ALP0C0E4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB40ALP0C0E4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB40ALP0C0E4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB40ALP0C0E4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.9■□□□□ 0.94
RAB40ALP0C0E4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RAB40ALP0C0E4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 1238.6 ms