Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.44■□□□□ 0.38
TRGV3P03979 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TRGV3P03979 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRGV3P03979 AC099791.2-201ENST00000605725 427 ntBASIC17.44■□□□□ 0.38
TRGV3P03979 AC092171.4-201ENST00000609130 632 ntBASIC17.44■□□□□ 0.38
TRGV3P03979 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRGV3P03979 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.44■□□□□ 0.38
TRGV3P03979 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.44■□□□□ 0.38
TRGV3P03979 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRGV3P03979 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRGV3P03979 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
TRGV3P03979 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV3P03979 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV3P03979 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.43■□□□□ 0.38
TRGV3P03979 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRGV3P03979 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV3P03979 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV3P03979 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV3P03979 AL353803.4-201ENST00000565882 1934 ntBASIC17.43■□□□□ 0.38
TRGV3P03979 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRGV3P03979 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV3P03979 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV3P03979 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.43■□□□□ 0.38
TRGV3P03979 AC009086.3-201ENST00000623486 1008 ntBASIC17.43■□□□□ 0.38
TRGV3P03979 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.43■□□□□ 0.38
TRGV3P03979 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV3P03979 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV3P03979 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV3P03979 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV3P03979 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRGV3P03979 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV3P03979 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV3P03979 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV3P03979 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV3P03979 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV3P03979 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV3P03979 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV3P03979 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV3P03979 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV3P03979 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV3P03979 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.42■□□□□ 0.38
TRGV3P03979 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV3P03979 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRGV3P03979 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV3P03979 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV3P03979 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.41■□□□□ 0.38
TRGV3P03979 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV3P03979 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.41■□□□□ 0.38
TRGV3P03979 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV3P03979 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.41■□□□□ 0.38
TRGV3P03979 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV3P03979 DUSP8P5-201ENST00000422884 1815 ntBASIC17.41■□□□□ 0.38
TRGV3P03979 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV3P03979 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.41■□□□□ 0.38
TRGV3P03979 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV3P03979 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRGV3P03979 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.41■□□□□ 0.38
TRGV3P03979 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRGV3P03979 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.41■□□□□ 0.38
TRGV3P03979 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV3P03979 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV3P03979 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV3P03979 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV3P03979 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.4■□□□□ 0.38
TRGV3P03979 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.4■□□□□ 0.38
TRGV3P03979 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
TRGV3P03979 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRGV3P03979 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.4■□□□□ 0.38
TRGV3P03979 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.4■□□□□ 0.38
TRGV3P03979 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
TRGV3P03979 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRGV3P03979 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRGV3P03979 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRGV3P03979 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRGV3P03979 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
TRGV3P03979 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.39■□□□□ 0.37
TRGV3P03979 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV3P03979 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.39■□□□□ 0.37
TRGV3P03979 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.39■□□□□ 0.37
TRGV3P03979 DUX4L19-201ENST00000557448 1267 ntBASIC17.39■□□□□ 0.37
TRGV3P03979 DUX4L4-201ENST00000566884 1269 ntBASIC17.39■□□□□ 0.37
TRGV3P03979 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRGV3P03979 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRGV3P03979 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.39■□□□□ 0.37
TRGV3P03979 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRGV3P03979 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.39■□□□□ 0.37
TRGV3P03979 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV3P03979 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRGV3P03979 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.39■□□□□ 0.37
TRGV3P03979 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRGV3P03979 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV3P03979 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.38■□□□□ 0.37
TRGV3P03979 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV3P03979 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV3P03979 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV3P03979 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV3P03979 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRGV3P03979 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.38■□□□□ 0.37
TRGV3P03979 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRGV3P03979 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms