Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.03■■□□□ 1.12
SOD1P00441 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
SOD1P00441 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SOD1P00441 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SOD1P00441 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
SOD1P00441 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
SOD1P00441 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.03■■□□□ 1.12
SOD1P00441 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.03■■□□□ 1.12
SOD1P00441 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SOD1P00441 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.12
SOD1P00441 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.02■■□□□ 1.12
SOD1P00441 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SOD1P00441 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
SOD1P00441 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.02■■□□□ 1.12
SOD1P00441 AC091305.1-201ENST00000479476 895 ntBASIC22.02■■□□□ 1.12
SOD1P00441 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SOD1P00441 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SOD1P00441 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.02■■□□□ 1.11
SOD1P00441 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.02■■□□□ 1.11
SOD1P00441 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
SOD1P00441 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.01■■□□□ 1.11
SOD1P00441 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SOD1P00441 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SOD1P00441 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SOD1P00441 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.01■■□□□ 1.11
SOD1P00441 BX842568.3-201ENST00000418104 571 ntBASIC22.01■■□□□ 1.11
SOD1P00441 SLC47A1P1-202ENST00000449666 945 ntBASIC22.01■■□□□ 1.11
SOD1P00441 AC027682.1-201ENST00000562846 899 ntBASIC22.01■■□□□ 1.11
SOD1P00441 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SOD1P00441 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SOD1P00441 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.01■■□□□ 1.11
SOD1P00441 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SOD1P00441 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SOD1P00441 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SOD1P00441 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22■■□□□ 1.11
SOD1P00441 AC008764.7-201ENST00000593779 1081 ntBASIC22■■□□□ 1.11
SOD1P00441 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22■■□□□ 1.11
SOD1P00441 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22■■□□□ 1.11
SOD1P00441 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SOD1P00441 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SOD1P00441 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SOD1P00441 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SOD1P00441 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SOD1P00441 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SOD1P00441 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
SOD1P00441 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.99■■□□□ 1.11
SOD1P00441 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
SOD1P00441 AC099791.1-201ENST00000416440 715 ntBASIC21.99■■□□□ 1.11
SOD1P00441 AC233992.3-201ENST00000607491 485 ntBASIC21.99■■□□□ 1.11
SOD1P00441 CA15P2-201ENST00000611168 834 ntBASIC21.99■■□□□ 1.11
SOD1P00441 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SOD1P00441 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SOD1P00441 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SOD1P00441 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SOD1P00441 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
SOD1P00441 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.99■■□□□ 1.11
SOD1P00441 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SOD1P00441 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
SOD1P00441 RASA4CP-201ENST00000424092 1398 ntBASIC21.99■■□□□ 1.11
SOD1P00441 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.99■■□□□ 1.11
SOD1P00441 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SOD1P00441 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SOD1P00441 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
SOD1P00441 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SOD1P00441 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
SOD1P00441 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SOD1P00441 OR2I1P-207ENST00000453522 948 ntBASIC21.98■■□□□ 1.11
SOD1P00441 AC010525.1-201ENST00000585559 441 ntBASIC21.98■■□□□ 1.11
SOD1P00441 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.98■■□□□ 1.11
SOD1P00441 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SOD1P00441 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
SOD1P00441 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SOD1P00441 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.97■■□□□ 1.11
SOD1P00441 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SOD1P00441 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SOD1P00441 ZNRF2P3-201ENST00000424200 374 ntBASIC21.97■■□□□ 1.11
SOD1P00441 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SOD1P00441 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SOD1P00441 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.97■■□□□ 1.11
SOD1P00441 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SOD1P00441 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SOD1P00441 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SOD1P00441 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SOD1P00441 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.96■■□□□ 1.11
SOD1P00441 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SOD1P00441 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SOD1P00441 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.96■■□□□ 1.11
SOD1P00441 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
SOD1P00441 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SOD1P00441 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.96■■□□□ 1.11
SOD1P00441 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SOD1P00441 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.96■■□□□ 1.11
SOD1P00441 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SOD1P00441 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SOD1P00441 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.95■■□□□ 1.1
SOD1P00441 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SOD1P00441 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SOD1P00441 AC105265.2-201ENST00000467189 838 ntBASIC21.95■■□□□ 1.1
SOD1P00441 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.95■■□□□ 1.1
SOD1P00441 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms