Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.95■■□□□ 1.26
TSPAN3O60637 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TSPAN3O60637 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TSPAN3O60637 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.94■■□□□ 1.26
TSPAN3O60637 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.94■■□□□ 1.26
TSPAN3O60637 BX842568.3-201ENST00000418104 571 ntBASIC22.94■■□□□ 1.26
TSPAN3O60637 SLC47A1P1-202ENST00000449666 945 ntBASIC22.94■■□□□ 1.26
TSPAN3O60637 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TSPAN3O60637 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.94■■□□□ 1.26
TSPAN3O60637 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TSPAN3O60637 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TSPAN3O60637 AL353803.4-201ENST00000565882 1934 ntBASIC22.94■■□□□ 1.26
TSPAN3O60637 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.94■■□□□ 1.26
TSPAN3O60637 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
TSPAN3O60637 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TSPAN3O60637 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.93■■□□□ 1.26
TSPAN3O60637 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.93■■□□□ 1.26
TSPAN3O60637 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TSPAN3O60637 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.93■■□□□ 1.26
TSPAN3O60637 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
TSPAN3O60637 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TSPAN3O60637 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TSPAN3O60637 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TSPAN3O60637 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
TSPAN3O60637 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TSPAN3O60637 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.92■■□□□ 1.26
TSPAN3O60637 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.92■■□□□ 1.26
TSPAN3O60637 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
TSPAN3O60637 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.92■■□□□ 1.26
TSPAN3O60637 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.92■■□□□ 1.26
TSPAN3O60637 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TSPAN3O60637 AC010525.1-201ENST00000585559 441 ntBASIC22.92■■□□□ 1.26
TSPAN3O60637 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
TSPAN3O60637 AC093323.1-202ENST00000635031 2045 ntBASIC22.92■■□□□ 1.26
TSPAN3O60637 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TSPAN3O60637 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
TSPAN3O60637 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TSPAN3O60637 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
TSPAN3O60637 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TSPAN3O60637 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.91■■□□□ 1.26
TSPAN3O60637 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.91■■□□□ 1.26
TSPAN3O60637 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TSPAN3O60637 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.91■■□□□ 1.26
TSPAN3O60637 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
TSPAN3O60637 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TSPAN3O60637 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
TSPAN3O60637 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TSPAN3O60637 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TSPAN3O60637 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TSPAN3O60637 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.9■■□□□ 1.26
TSPAN3O60637 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.9■■□□□ 1.26
TSPAN3O60637 AC126544.1-201ENST00000580842 1059 ntBASIC22.9■■□□□ 1.26
TSPAN3O60637 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
TSPAN3O60637 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.9■■□□□ 1.26
TSPAN3O60637 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TSPAN3O60637 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
TSPAN3O60637 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TSPAN3O60637 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.89■■□□□ 1.25
TSPAN3O60637 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TSPAN3O60637 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TSPAN3O60637 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.89■■□□□ 1.25
TSPAN3O60637 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.89■■□□□ 1.25
TSPAN3O60637 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.88■■□□□ 1.25
TSPAN3O60637 ANOS2P-203ENST00000472227 1816 ntBASIC22.88■■□□□ 1.25
TSPAN3O60637 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
TSPAN3O60637 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.88■■□□□ 1.25
TSPAN3O60637 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
TSPAN3O60637 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TSPAN3O60637 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TSPAN3O60637 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.87■■□□□ 1.25
TSPAN3O60637 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
TSPAN3O60637 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.87■■□□□ 1.25
TSPAN3O60637 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
TSPAN3O60637 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TSPAN3O60637 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TSPAN3O60637 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TSPAN3O60637 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
TSPAN3O60637 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
TSPAN3O60637 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TSPAN3O60637 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.86■■□□□ 1.25
TSPAN3O60637 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
TSPAN3O60637 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
TSPAN3O60637 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
TSPAN3O60637 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
TSPAN3O60637 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.86■■□□□ 1.25
TSPAN3O60637 AC004687.1-201ENST00000579003 1625 ntBASIC22.86■■□□□ 1.25
TSPAN3O60637 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
TSPAN3O60637 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
TSPAN3O60637 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.85■■□□□ 1.25
TSPAN3O60637 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
TSPAN3O60637 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TSPAN3O60637 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.85■■□□□ 1.25
TSPAN3O60637 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TSPAN3O60637 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TSPAN3O60637 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
TSPAN3O60637 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
TSPAN3O60637 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
TSPAN3O60637 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
TSPAN3O60637 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TSPAN3O60637 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms