Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.56■□□□□ 0.72
GMDSO60547 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GMDSO60547 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GMDSO60547 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GMDSO60547 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.55■□□□□ 0.72
GMDSO60547 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GMDSO60547 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GMDSO60547 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.55■□□□□ 0.72
GMDSO60547 AL451085.2-201ENST00000605085 799 ntBASIC19.55■□□□□ 0.72
GMDSO60547 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
GMDSO60547 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GMDSO60547 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GMDSO60547 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GMDSO60547 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GMDSO60547 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.54■□□□□ 0.72
GMDSO60547 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GMDSO60547 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GMDSO60547 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.54■□□□□ 0.72
GMDSO60547 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
GMDSO60547 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GMDSO60547 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GMDSO60547 SLC25A24-204ENST00000569674 2357 ntBASIC19.54■□□□□ 0.72
GMDSO60547 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.54■□□□□ 0.72
GMDSO60547 AC009299.2-201ENST00000482477 511 ntBASIC19.54■□□□□ 0.72
GMDSO60547 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.54■□□□□ 0.72
GMDSO60547 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.54■□□□□ 0.72
GMDSO60547 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GMDSO60547 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
GMDSO60547 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
GMDSO60547 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
GMDSO60547 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
GMDSO60547 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GMDSO60547 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
GMDSO60547 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.53■□□□□ 0.72
GMDSO60547 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GMDSO60547 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GMDSO60547 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
GMDSO60547 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GMDSO60547 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
GMDSO60547 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
GMDSO60547 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
GMDSO60547 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GMDSO60547 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GMDSO60547 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.52■□□□□ 0.72
GMDSO60547 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
GMDSO60547 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
GMDSO60547 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.52■□□□□ 0.72
GMDSO60547 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
GMDSO60547 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GMDSO60547 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
GMDSO60547 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.52■□□□□ 0.72
GMDSO60547 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.52■□□□□ 0.72
GMDSO60547 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.52■□□□□ 0.72
GMDSO60547 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
GMDSO60547 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.52■□□□□ 0.72
GMDSO60547 AL121603.2-201ENST00000557373 2117 ntBASIC19.52■□□□□ 0.72
GMDSO60547 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
GMDSO60547 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
GMDSO60547 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.52■□□□□ 0.71
GMDSO60547 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
GMDSO60547 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
GMDSO60547 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
GMDSO60547 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.51■□□□□ 0.71
GMDSO60547 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
GMDSO60547 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GMDSO60547 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
GMDSO60547 AC092068.2-201ENST00000590491 1708 ntBASIC19.51■□□□□ 0.71
GMDSO60547 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GMDSO60547 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GMDSO60547 AL137060.1-201ENST00000618151 2648 ntBASIC19.51■□□□□ 0.71
GMDSO60547 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
GMDSO60547 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
GMDSO60547 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.51■□□□□ 0.71
GMDSO60547 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.51■□□□□ 0.71
GMDSO60547 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.51■□□□□ 0.71
GMDSO60547 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GMDSO60547 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
GMDSO60547 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GMDSO60547 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GMDSO60547 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
GMDSO60547 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GMDSO60547 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GMDSO60547 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.5■□□□□ 0.71
GMDSO60547 AC239859.2-201ENST00000444165 318 ntBASIC19.5■□□□□ 0.71
GMDSO60547 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
GMDSO60547 SNX5-217ENST00000606557 1087 ntBASIC19.5■□□□□ 0.71
GMDSO60547 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.5■□□□□ 0.71
GMDSO60547 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.5■□□□□ 0.71
GMDSO60547 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.5■□□□□ 0.71
GMDSO60547 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.5■□□□□ 0.71
GMDSO60547 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
GMDSO60547 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.49■□□□□ 0.71
GMDSO60547 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GMDSO60547 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GMDSO60547 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
GMDSO60547 MIR4787-201ENST00000607364 84 ntBASIC19.49■□□□□ 0.71
GMDSO60547 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
GMDSO60547 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
GMDSO60547 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
GMDSO60547 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms