Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TO15178 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TO15178 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TO15178 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
TO15178 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TO15178 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.5■□□□□ 0.87
TO15178 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TO15178 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TO15178 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TO15178 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TO15178 SERBP1P1-201ENST00000396021 1160 ntBASIC20.5■□□□□ 0.87
TO15178 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.5■□□□□ 0.87
TO15178 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.5■□□□□ 0.87
TO15178 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TO15178 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.5■□□□□ 0.87
TO15178 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TO15178 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.5■□□□□ 0.87
TO15178 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.5■□□□□ 0.87
TO15178 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TO15178 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TO15178 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TO15178 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.49■□□□□ 0.87
TO15178 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.49■□□□□ 0.87
TO15178 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.49■□□□□ 0.87
TO15178 AC011298.3-201ENST00000615796 283 ntBASIC20.49■□□□□ 0.87
TO15178 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.49■□□□□ 0.87
TO15178 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TO15178 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TO15178 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TO15178 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.48■□□□□ 0.87
TO15178 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TO15178 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TO15178 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TO15178 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TO15178 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TO15178 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TO15178 UNC93B3-201ENST00000308076 687 ntBASIC20.48■□□□□ 0.87
TO15178 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TO15178 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TO15178 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TO15178 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TO15178 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.48■□□□□ 0.87
TO15178 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TO15178 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TO15178 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TO15178 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TO15178 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
TO15178 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TO15178 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TO15178 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TO15178 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.47■□□□□ 0.87
TO15178 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TO15178 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TO15178 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TO15178 AC133637.1-201ENST00000624115 1537 ntBASIC20.47■□□□□ 0.87
TO15178 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TO15178 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TO15178 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TO15178 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TO15178 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TO15178 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.46■□□□□ 0.87
TO15178 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TO15178 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TO15178 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TO15178 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TO15178 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
TO15178 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.45■□□□□ 0.86
TO15178 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TO15178 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TO15178 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TO15178 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.45■□□□□ 0.86
TO15178 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TO15178 AC136469.2-201ENST00000623944 1028 ntBASIC20.45■□□□□ 0.86
TO15178 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
TO15178 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TO15178 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TO15178 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TO15178 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TO15178 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.44■□□□□ 0.86
TO15178 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.44■□□□□ 0.86
TO15178 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.44■□□□□ 0.86
TO15178 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.44■□□□□ 0.86
TO15178 AC096631.2-201ENST00000436136 790 ntBASIC20.44■□□□□ 0.86
TO15178 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.44■□□□□ 0.86
TO15178 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TO15178 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TO15178 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.44■□□□□ 0.86
TO15178 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TO15178 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TO15178 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.44■□□□□ 0.86
TO15178 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TO15178 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TO15178 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TO15178 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TO15178 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TO15178 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TO15178 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TO15178 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.43■□□□□ 0.86
TO15178 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TO15178 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms