Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COLCA2A8K830 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COLCA2A8K830 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COLCA2A8K830 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COLCA2A8K830 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.26■□□□□ 0.35
COLCA2A8K830 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
COLCA2A8K830 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COLCA2A8K830 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COLCA2A8K830 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
COLCA2A8K830 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
COLCA2A8K830 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.25■□□□□ 0.35
COLCA2A8K830 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COLCA2A8K830 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
COLCA2A8K830 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COLCA2A8K830 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.25■□□□□ 0.35
COLCA2A8K830 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COLCA2A8K830 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
COLCA2A8K830 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COLCA2A8K830 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.25■□□□□ 0.35
COLCA2A8K830 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COLCA2A8K830 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COLCA2A8K830 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.24■□□□□ 0.35
COLCA2A8K830 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COLCA2A8K830 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
COLCA2A8K830 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COLCA2A8K830 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
COLCA2A8K830 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.24■□□□□ 0.35
COLCA2A8K830 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COLCA2A8K830 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.24■□□□□ 0.35
COLCA2A8K830 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
COLCA2A8K830 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
COLCA2A8K830 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
COLCA2A8K830 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.23■□□□□ 0.35
COLCA2A8K830 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.23■□□□□ 0.35
COLCA2A8K830 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.23■□□□□ 0.35
COLCA2A8K830 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.23■□□□□ 0.35
COLCA2A8K830 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
COLCA2A8K830 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
COLCA2A8K830 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
COLCA2A8K830 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COLCA2A8K830 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COLCA2A8K830 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.23■□□□□ 0.35
COLCA2A8K830 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COLCA2A8K830 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COLCA2A8K830 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
COLCA2A8K830 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
COLCA2A8K830 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
COLCA2A8K830 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COLCA2A8K830 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COLCA2A8K830 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COLCA2A8K830 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.22■□□□□ 0.35
COLCA2A8K830 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COLCA2A8K830 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
COLCA2A8K830 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COLCA2A8K830 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
COLCA2A8K830 AC026471.1-201ENST00000564629 3026 ntBASIC17.22■□□□□ 0.35
COLCA2A8K830 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.22■□□□□ 0.35
COLCA2A8K830 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.21■□□□□ 0.35
COLCA2A8K830 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COLCA2A8K830 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COLCA2A8K830 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
COLCA2A8K830 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COLCA2A8K830 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
COLCA2A8K830 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.21■□□□□ 0.35
COLCA2A8K830 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COLCA2A8K830 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
COLCA2A8K830 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COLCA2A8K830 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COLCA2A8K830 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.21■□□□□ 0.35
COLCA2A8K830 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
COLCA2A8K830 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.21■□□□□ 0.35
COLCA2A8K830 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COLCA2A8K830 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
COLCA2A8K830 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COLCA2A8K830 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
COLCA2A8K830 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
COLCA2A8K830 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COLCA2A8K830 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COLCA2A8K830 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COLCA2A8K830 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COLCA2A8K830 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COLCA2A8K830 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COLCA2A8K830 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.2■□□□□ 0.34
COLCA2A8K830 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA2A8K830 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA2A8K830 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA2A8K830 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA2A8K830 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
COLCA2A8K830 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA2A8K830 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.19■□□□□ 0.34
COLCA2A8K830 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
COLCA2A8K830 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17.19■□□□□ 0.34
COLCA2A8K830 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.19■□□□□ 0.34
COLCA2A8K830 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA2A8K830 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.19■□□□□ 0.34
COLCA2A8K830 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA2A8K830 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA2A8K830 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
COLCA2A8K830 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COLCA2A8K830 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms