Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SPDYE4A6NLX3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
SPDYE4A6NLX3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
SPDYE4A6NLX3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
SPDYE4A6NLX3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC24.71■■□□□ 1.55
SPDYE4A6NLX3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.71■■□□□ 1.55
SPDYE4A6NLX3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
SPDYE4A6NLX3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SPDYE4A6NLX3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SPDYE4A6NLX3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.71■■□□□ 1.55
SPDYE4A6NLX3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SPDYE4A6NLX3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
SPDYE4A6NLX3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC24.71■■□□□ 1.55
SPDYE4A6NLX3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SPDYE4A6NLX3 AC137767.1-201ENST00000602918 1920 ntBASIC24.71■■□□□ 1.55
SPDYE4A6NLX3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.7■■□□□ 1.55
SPDYE4A6NLX3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
SPDYE4A6NLX3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
SPDYE4A6NLX3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.55
SPDYE4A6NLX3 AC090877.2-201ENST00000558441 1738 ntBASIC24.7■■□□□ 1.54
SPDYE4A6NLX3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SPDYE4A6NLX3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.7■■□□□ 1.54
SPDYE4A6NLX3 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.7■■□□□ 1.54
SPDYE4A6NLX3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SPDYE4A6NLX3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
SPDYE4A6NLX3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SPDYE4A6NLX3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SPDYE4A6NLX3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.69■■□□□ 1.54
SPDYE4A6NLX3 SNX5-217ENST00000606557 1087 ntBASIC24.69■■□□□ 1.54
SPDYE4A6NLX3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SPDYE4A6NLX3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
SPDYE4A6NLX3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
SPDYE4A6NLX3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SPDYE4A6NLX3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SPDYE4A6NLX3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
SPDYE4A6NLX3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
SPDYE4A6NLX3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.68■■□□□ 1.54
SPDYE4A6NLX3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SPDYE4A6NLX3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SPDYE4A6NLX3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SPDYE4A6NLX3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.68■■□□□ 1.54
SPDYE4A6NLX3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
SPDYE4A6NLX3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC24.68■■□□□ 1.54
SPDYE4A6NLX3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.68■■□□□ 1.54
SPDYE4A6NLX3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
SPDYE4A6NLX3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC24.68■■□□□ 1.54
SPDYE4A6NLX3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SPDYE4A6NLX3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.68■■□□□ 1.54
SPDYE4A6NLX3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
SPDYE4A6NLX3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.67■■□□□ 1.54
SPDYE4A6NLX3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
SPDYE4A6NLX3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.67■■□□□ 1.54
SPDYE4A6NLX3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC24.67■■□□□ 1.54
SPDYE4A6NLX3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SPDYE4A6NLX3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SPDYE4A6NLX3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
SPDYE4A6NLX3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SPDYE4A6NLX3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.67■■□□□ 1.54
SPDYE4A6NLX3 AC106739.1-201ENST00000617035 715 ntBASIC24.67■■□□□ 1.54
SPDYE4A6NLX3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.67■■□□□ 1.54
SPDYE4A6NLX3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SPDYE4A6NLX3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SPDYE4A6NLX3 AC141586.4-201ENST00000624558 1573 ntBASIC24.67■■□□□ 1.54
SPDYE4A6NLX3 AL121603.2-201ENST00000557373 2117 ntBASIC24.67■■□□□ 1.54
SPDYE4A6NLX3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SPDYE4A6NLX3 SRD5A1P1-201ENST00000442297 786 ntBASIC24.66■■□□□ 1.54
SPDYE4A6NLX3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
SPDYE4A6NLX3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SPDYE4A6NLX3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.65■■□□□ 1.54
SPDYE4A6NLX3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SPDYE4A6NLX3 UNC93B3-201ENST00000308076 687 ntBASIC24.65■■□□□ 1.54
SPDYE4A6NLX3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SPDYE4A6NLX3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SPDYE4A6NLX3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SPDYE4A6NLX3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.65■■□□□ 1.54
SPDYE4A6NLX3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.65■■□□□ 1.54
SPDYE4A6NLX3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.65■■□□□ 1.54
SPDYE4A6NLX3 MIR6722-201ENST00000617286 78 ntBASIC24.65■■□□□ 1.54
SPDYE4A6NLX3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SPDYE4A6NLX3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
SPDYE4A6NLX3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SPDYE4A6NLX3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SPDYE4A6NLX3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SPDYE4A6NLX3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SPDYE4A6NLX3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SPDYE4A6NLX3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.64■■□□□ 1.54
SPDYE4A6NLX3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SPDYE4A6NLX3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.64■■□□□ 1.54
SPDYE4A6NLX3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.64■■□□□ 1.54
SPDYE4A6NLX3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SPDYE4A6NLX3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC24.64■■□□□ 1.53
SPDYE4A6NLX3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
SPDYE4A6NLX3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SPDYE4A6NLX3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SPDYE4A6NLX3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SPDYE4A6NLX3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SPDYE4A6NLX3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.63■■□□□ 1.53
SPDYE4A6NLX3 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
SPDYE4A6NLX3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
SPDYE4A6NLX3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms