Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CGB1A6NKQ9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CGB1A6NKQ9 AC005703.6-201ENST00000623265 1329 ntBASIC17.73■□□□□ 0.43
CGB1A6NKQ9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGB1A6NKQ9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CGB1A6NKQ9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CGB1A6NKQ9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.73■□□□□ 0.43
CGB1A6NKQ9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.73■□□□□ 0.43
CGB1A6NKQ9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGB1A6NKQ9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.73■□□□□ 0.43
CGB1A6NKQ9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGB1A6NKQ9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.73■□□□□ 0.43
CGB1A6NKQ9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CGB1A6NKQ9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.73■□□□□ 0.43
CGB1A6NKQ9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.73■□□□□ 0.43
CGB1A6NKQ9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGB1A6NKQ9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.73■□□□□ 0.43
CGB1A6NKQ9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
CGB1A6NKQ9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGB1A6NKQ9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGB1A6NKQ9 GUSBP5-202ENST00000510805 1989 ntBASIC17.73■□□□□ 0.43
CGB1A6NKQ9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGB1A6NKQ9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CGB1A6NKQ9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CGB1A6NKQ9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CGB1A6NKQ9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CGB1A6NKQ9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CGB1A6NKQ9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CGB1A6NKQ9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CGB1A6NKQ9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CGB1A6NKQ9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CGB1A6NKQ9 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.72■□□□□ 0.43
CGB1A6NKQ9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CGB1A6NKQ9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CGB1A6NKQ9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.71■□□□□ 0.43
CGB1A6NKQ9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CGB1A6NKQ9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CGB1A6NKQ9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CGB1A6NKQ9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CGB1A6NKQ9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.71■□□□□ 0.43
CGB1A6NKQ9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CGB1A6NKQ9 Z92544.1-202ENST00000571933 1220 ntBASIC17.71■□□□□ 0.43
CGB1A6NKQ9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CGB1A6NKQ9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.71■□□□□ 0.43
CGB1A6NKQ9 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.71■□□□□ 0.43
CGB1A6NKQ9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CGB1A6NKQ9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CGB1A6NKQ9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.7■□□□□ 0.42
CGB1A6NKQ9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CGB1A6NKQ9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.7■□□□□ 0.42
CGB1A6NKQ9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CGB1A6NKQ9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CGB1A6NKQ9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.7■□□□□ 0.42
CGB1A6NKQ9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.7■□□□□ 0.42
CGB1A6NKQ9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.7■□□□□ 0.42
CGB1A6NKQ9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.7■□□□□ 0.42
CGB1A6NKQ9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CGB1A6NKQ9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CGB1A6NKQ9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CGB1A6NKQ9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CGB1A6NKQ9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CGB1A6NKQ9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CGB1A6NKQ9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CGB1A6NKQ9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.7■□□□□ 0.42
CGB1A6NKQ9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 AL451085.2-201ENST00000605085 799 ntBASIC17.69■□□□□ 0.42
CGB1A6NKQ9 MIR4787-201ENST00000607364 84 ntBASIC17.69■□□□□ 0.42
CGB1A6NKQ9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CGB1A6NKQ9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CGB1A6NKQ9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CGB1A6NKQ9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CGB1A6NKQ9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CGB1A6NKQ9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CGB1A6NKQ9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CGB1A6NKQ9 AC239859.2-201ENST00000444165 318 ntBASIC17.68■□□□□ 0.42
CGB1A6NKQ9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CGB1A6NKQ9 AC009299.2-201ENST00000482477 511 ntBASIC17.68■□□□□ 0.42
CGB1A6NKQ9 KRT125P-201ENST00000546827 989 ntBASIC17.68■□□□□ 0.42
CGB1A6NKQ9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CGB1A6NKQ9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CGB1A6NKQ9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms