Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV12-3A0A0B4J271 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.48■□□□□ 0.23
TRAV12-3A0A0B4J271 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV12-3A0A0B4J271 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV12-3A0A0B4J271 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.48■□□□□ 0.23
TRAV12-3A0A0B4J271 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV12-3A0A0B4J271 AL353803.4-201ENST00000565882 1934 ntBASIC16.48■□□□□ 0.23
TRAV12-3A0A0B4J271 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV12-3A0A0B4J271 AC021242.3-201ENST00000607598 1377 ntBASIC16.48■□□□□ 0.23
TRAV12-3A0A0B4J271 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV12-3A0A0B4J271 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV12-3A0A0B4J271 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV12-3A0A0B4J271 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-3A0A0B4J271 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-3A0A0B4J271 AL117328.2-201ENST00000624617 1940 ntBASIC16.47■□□□□ 0.23
TRAV12-3A0A0B4J271 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-3A0A0B4J271 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV12-3A0A0B4J271 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-3A0A0B4J271 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-3A0A0B4J271 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-3A0A0B4J271 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-3A0A0B4J271 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-3A0A0B4J271 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-3A0A0B4J271 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-3A0A0B4J271 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-3A0A0B4J271 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-3A0A0B4J271 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-3A0A0B4J271 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV12-3A0A0B4J271 AC005703.6-201ENST00000623265 1329 ntBASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 KRT125P-201ENST00000546827 989 ntBASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 AC079834.2-201ENST00000609776 1949 ntBASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV12-3A0A0B4J271 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.46■□□□□ 0.22
TRAV12-3A0A0B4J271 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-3A0A0B4J271 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRAV12-3A0A0B4J271 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-3A0A0B4J271 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-3A0A0B4J271 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-3A0A0B4J271 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-3A0A0B4J271 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-3A0A0B4J271 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-3A0A0B4J271 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRAV12-3A0A0B4J271 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-3A0A0B4J271 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRAV12-3A0A0B4J271 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-3A0A0B4J271 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRAV12-3A0A0B4J271 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-3A0A0B4J271 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV12-3A0A0B4J271 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.45■□□□□ 0.22
TRAV12-3A0A0B4J271 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV12-3A0A0B4J271 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRAV12-3A0A0B4J271 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV12-3A0A0B4J271 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRAV12-3A0A0B4J271 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV12-3A0A0B4J271 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV12-3A0A0B4J271 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRAV12-3A0A0B4J271 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV12-3A0A0B4J271 RARRES2P1-201ENST00000474487 481 ntBASIC16.44■□□□□ 0.22
TRAV12-3A0A0B4J271 MIR6722-201ENST00000617286 78 ntBASIC16.44■□□□□ 0.22
TRAV12-3A0A0B4J271 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRAV12-3A0A0B4J271 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRAV12-3A0A0B4J271 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV12-3A0A0B4J271 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV12-3A0A0B4J271 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV12-3A0A0B4J271 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV12-3A0A0B4J271 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV12-3A0A0B4J271 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV12-3A0A0B4J271 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV12-3A0A0B4J271 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV12-3A0A0B4J271 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV12-3A0A0B4J271 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV12-3A0A0B4J271 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV12-3A0A0B4J271 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV12-3A0A0B4J271 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV12-3A0A0B4J271 AC144652.1-201ENST00000609974 1624 ntBASIC16.42■□□□□ 0.22
TRAV12-3A0A0B4J271 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TRAV12-3A0A0B4J271 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV12-3A0A0B4J271 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TRAV12-3A0A0B4J271 AC092028.1-203ENST00000608262 953 ntBASIC16.42■□□□□ 0.22
TRAV12-3A0A0B4J271 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV12-3A0A0B4J271 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms