Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV13-1A0A0B4J241 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV13-1A0A0B4J241 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV13-1A0A0B4J241 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV13-1A0A0B4J241 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRAV13-1A0A0B4J241 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV13-1A0A0B4J241 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV13-1A0A0B4J241 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV13-1A0A0B4J241 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV13-1A0A0B4J241 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV13-1A0A0B4J241 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV13-1A0A0B4J241 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV13-1A0A0B4J241 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV13-1A0A0B4J241 AC131274.2-201ENST00000580697 1507 ntBASIC15.43■□□□□ 0.06
TRAV13-1A0A0B4J241 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV13-1A0A0B4J241 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV13-1A0A0B4J241 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV13-1A0A0B4J241 HYI-210ENST00000486909 905 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV13-1A0A0B4J241 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV13-1A0A0B4J241 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV13-1A0A0B4J241 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRAV13-1A0A0B4J241 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV13-1A0A0B4J241 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV13-1A0A0B4J241 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRAV13-1A0A0B4J241 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV13-1A0A0B4J241 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV13-1A0A0B4J241 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV13-1A0A0B4J241 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV13-1A0A0B4J241 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV13-1A0A0B4J241 ECEL1P1-201ENST00000373592 1742 ntBASIC15.41■□□□□ 0.06
TRAV13-1A0A0B4J241 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV13-1A0A0B4J241 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV13-1A0A0B4J241 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC15.41■□□□□ 0.06
TRAV13-1A0A0B4J241 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRAV13-1A0A0B4J241 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV13-1A0A0B4J241 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV13-1A0A0B4J241 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV13-1A0A0B4J241 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV13-1A0A0B4J241 AC127496.7-201ENST00000625110 1798 ntBASIC15.41■□□□□ 0.06
TRAV13-1A0A0B4J241 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV13-1A0A0B4J241 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRAV13-1A0A0B4J241 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV13-1A0A0B4J241 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV13-1A0A0B4J241 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV13-1A0A0B4J241 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRAV13-1A0A0B4J241 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV13-1A0A0B4J241 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV13-1A0A0B4J241 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV13-1A0A0B4J241 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV13-1A0A0B4J241 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV13-1A0A0B4J241 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV13-1A0A0B4J241 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAV13-1A0A0B4J241 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV13-1A0A0B4J241 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV13-1A0A0B4J241 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV13-1A0A0B4J241 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC15.4■□□□□ 0.06
TRAV13-1A0A0B4J241 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRAV13-1A0A0B4J241 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV13-1A0A0B4J241 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
TRAV13-1A0A0B4J241 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV13-1A0A0B4J241 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV13-1A0A0B4J241 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV13-1A0A0B4J241 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
TRAV13-1A0A0B4J241 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV13-1A0A0B4J241 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV13-1A0A0B4J241 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV13-1A0A0B4J241 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV13-1A0A0B4J241 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV13-1A0A0B4J241 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV13-1A0A0B4J241 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV13-1A0A0B4J241 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC15.39■□□□□ 0.05
TRAV13-1A0A0B4J241 GAK-223ENST00000628912 497 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV13-1A0A0B4J241 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRAV13-1A0A0B4J241 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV13-1A0A0B4J241 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV13-1A0A0B4J241 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV13-1A0A0B4J241 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV13-1A0A0B4J241 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV13-1A0A0B4J241 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV13-1A0A0B4J241 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms