Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.01■□□□□ 0.79
TRGV5A0A0B4J1U4 AC097381.1-201ENST00000429019 1296 ntBASIC20.01■□□□□ 0.79
TRGV5A0A0B4J1U4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.01■□□□□ 0.79
TRGV5A0A0B4J1U4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.01■□□□□ 0.79
TRGV5A0A0B4J1U4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.01■□□□□ 0.79
TRGV5A0A0B4J1U4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRGV5A0A0B4J1U4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRGV5A0A0B4J1U4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.01■□□□□ 0.79
TRGV5A0A0B4J1U4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRGV5A0A0B4J1U4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRGV5A0A0B4J1U4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRGV5A0A0B4J1U4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRGV5A0A0B4J1U4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRGV5A0A0B4J1U4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRGV5A0A0B4J1U4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20■□□□□ 0.79
TRGV5A0A0B4J1U4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRGV5A0A0B4J1U4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20■□□□□ 0.79
TRGV5A0A0B4J1U4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRGV5A0A0B4J1U4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20■□□□□ 0.79
TRGV5A0A0B4J1U4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20■□□□□ 0.79
TRGV5A0A0B4J1U4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
TRGV5A0A0B4J1U4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRGV5A0A0B4J1U4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRGV5A0A0B4J1U4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.99■□□□□ 0.79
TRGV5A0A0B4J1U4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRGV5A0A0B4J1U4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRGV5A0A0B4J1U4 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.99■□□□□ 0.79
TRGV5A0A0B4J1U4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRGV5A0A0B4J1U4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.99■□□□□ 0.79
TRGV5A0A0B4J1U4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.99■□□□□ 0.79
TRGV5A0A0B4J1U4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
TRGV5A0A0B4J1U4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRGV5A0A0B4J1U4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRGV5A0A0B4J1U4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.99■□□□□ 0.79
TRGV5A0A0B4J1U4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.99■□□□□ 0.79
TRGV5A0A0B4J1U4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRGV5A0A0B4J1U4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.99■□□□□ 0.79
TRGV5A0A0B4J1U4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRGV5A0A0B4J1U4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.99■□□□□ 0.79
TRGV5A0A0B4J1U4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.99■□□□□ 0.79
TRGV5A0A0B4J1U4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRGV5A0A0B4J1U4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRGV5A0A0B4J1U4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRGV5A0A0B4J1U4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.98■□□□□ 0.79
TRGV5A0A0B4J1U4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TRGV5A0A0B4J1U4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRGV5A0A0B4J1U4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.98■□□□□ 0.79
TRGV5A0A0B4J1U4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TRGV5A0A0B4J1U4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRGV5A0A0B4J1U4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.98■□□□□ 0.79
TRGV5A0A0B4J1U4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TRGV5A0A0B4J1U4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRGV5A0A0B4J1U4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.97■□□□□ 0.79
TRGV5A0A0B4J1U4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRGV5A0A0B4J1U4 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.97■□□□□ 0.79
TRGV5A0A0B4J1U4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRGV5A0A0B4J1U4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.97■□□□□ 0.79
TRGV5A0A0B4J1U4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.97■□□□□ 0.79
TRGV5A0A0B4J1U4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRGV5A0A0B4J1U4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRGV5A0A0B4J1U4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRGV5A0A0B4J1U4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRGV5A0A0B4J1U4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRGV5A0A0B4J1U4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRGV5A0A0B4J1U4 AL353803.4-201ENST00000565882 1934 ntBASIC19.96■□□□□ 0.79
TRGV5A0A0B4J1U4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRGV5A0A0B4J1U4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRGV5A0A0B4J1U4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRGV5A0A0B4J1U4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRGV5A0A0B4J1U4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRGV5A0A0B4J1U4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.96■□□□□ 0.79
TRGV5A0A0B4J1U4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.96■□□□□ 0.79
TRGV5A0A0B4J1U4 AP005435.1-201ENST00000529293 1178 ntBASIC19.96■□□□□ 0.79
TRGV5A0A0B4J1U4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.96■□□□□ 0.79
TRGV5A0A0B4J1U4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRGV5A0A0B4J1U4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRGV5A0A0B4J1U4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TRGV5A0A0B4J1U4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.96■□□□□ 0.79
TRGV5A0A0B4J1U4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TRGV5A0A0B4J1U4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
TRGV5A0A0B4J1U4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRGV5A0A0B4J1U4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRGV5A0A0B4J1U4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRGV5A0A0B4J1U4 MIR572-201ENST00000384983 95 ntBASIC19.95■□□□□ 0.78
TRGV5A0A0B4J1U4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.95■□□□□ 0.78
TRGV5A0A0B4J1U4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRGV5A0A0B4J1U4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRGV5A0A0B4J1U4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.95■□□□□ 0.78
TRGV5A0A0B4J1U4 AC087623.3-201ENST00000607047 1098 ntBASIC19.95■□□□□ 0.78
TRGV5A0A0B4J1U4 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.95■□□□□ 0.78
TRGV5A0A0B4J1U4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.95■□□□□ 0.78
TRGV5A0A0B4J1U4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRGV5A0A0B4J1U4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRGV5A0A0B4J1U4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRGV5A0A0B4J1U4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRGV5A0A0B4J1U4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRGV5A0A0B4J1U4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRGV5A0A0B4J1U4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.94■□□□□ 0.78
TRGV5A0A0B4J1U4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRGV5A0A0B4J1U4 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms