Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRBV6-8A0A0A6YYG3 LINC01529-204ENST00000636474 1715 ntBASIC15.45■□□□□ 0.06
TRBV6-8A0A0A6YYG3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-8A0A0A6YYG3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC15.44■□□□□ 0.06
TRBV6-8A0A0A6YYG3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-8A0A0A6YYG3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-8A0A0A6YYG3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-8A0A0A6YYG3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-8A0A0A6YYG3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC15.44■□□□□ 0.06
TRBV6-8A0A0A6YYG3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRBV6-8A0A0A6YYG3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC15.44■□□□□ 0.06
TRBV6-8A0A0A6YYG3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC15.44■□□□□ 0.06
TRBV6-8A0A0A6YYG3 MTDHP2-201ENST00000601468 714 ntBASIC15.44■□□□□ 0.06
TRBV6-8A0A0A6YYG3 FP325331.1-202ENST00000623531 1380 ntBASIC15.44■□□□□ 0.06
TRBV6-8A0A0A6YYG3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-8A0A0A6YYG3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-8A0A0A6YYG3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-8A0A0A6YYG3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRBV6-8A0A0A6YYG3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-8A0A0A6YYG3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-8A0A0A6YYG3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-8A0A0A6YYG3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-8A0A0A6YYG3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-8A0A0A6YYG3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV6-8A0A0A6YYG3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV6-8A0A0A6YYG3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-8A0A0A6YYG3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRBV6-8A0A0A6YYG3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV6-8A0A0A6YYG3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-8A0A0A6YYG3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.43■□□□□ 0.06
TRBV6-8A0A0A6YYG3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-8A0A0A6YYG3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-8A0A0A6YYG3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-8A0A0A6YYG3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRBV6-8A0A0A6YYG3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRBV6-8A0A0A6YYG3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRBV6-8A0A0A6YYG3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 RARRES2P1-201ENST00000474487 481 ntBASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 MIR4787-201ENST00000607364 84 ntBASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV6-8A0A0A6YYG3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-8A0A0A6YYG3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-8A0A0A6YYG3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-8A0A0A6YYG3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-8A0A0A6YYG3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-8A0A0A6YYG3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC15.41■□□□□ 0.06
TRBV6-8A0A0A6YYG3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-8A0A0A6YYG3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRBV6-8A0A0A6YYG3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV6-8A0A0A6YYG3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV6-8A0A0A6YYG3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRBV6-8A0A0A6YYG3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 AC239859.2-201ENST00000444165 318 ntBASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 ECEL1P1-201ENST00000373592 1742 ntBASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-8A0A0A6YYG3 EP400NL-214ENST00000641289 2402 ntBASIC15.39■□□□□ 0.05
TRBV6-8A0A0A6YYG3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-8A0A0A6YYG3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRBV6-8A0A0A6YYG3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-8A0A0A6YYG3 AC242852.2-201ENST00000615738 1807 ntBASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms