Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
BBS1Q8NFJ9 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC12.28□□□□□ -0.44
BBS1Q8NFJ9 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BBS1Q8NFJ9 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
BBS1Q8NFJ9 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC12.28□□□□□ -0.44
BBS1Q8NFJ9 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.28□□□□□ -0.44
BBS1Q8NFJ9 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
BBS1Q8NFJ9 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BBS1Q8NFJ9 CTAGE13P-201ENST00000416709 2446 ntBASIC12.28□□□□□ -0.44
BBS1Q8NFJ9 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BBS1Q8NFJ9 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BBS1Q8NFJ9 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BBS1Q8NFJ9 AC015909.3-201ENST00000572855 1794 ntBASIC12.28□□□□□ -0.44
BBS1Q8NFJ9 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
BBS1Q8NFJ9 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BBS1Q8NFJ9 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC12.28□□□□□ -0.44
BBS1Q8NFJ9 AC124319.4-201ENST00000622931 2161 ntBASIC12.28□□□□□ -0.44
BBS1Q8NFJ9 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BBS1Q8NFJ9 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
BBS1Q8NFJ9 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
BBS1Q8NFJ9 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
BBS1Q8NFJ9 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
BBS1Q8NFJ9 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC12.27□□□□□ -0.44
BBS1Q8NFJ9 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.27□□□□□ -0.44
BBS1Q8NFJ9 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC12.27□□□□□ -0.44
BBS1Q8NFJ9 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
BBS1Q8NFJ9 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC12.27□□□□□ -0.44
BBS1Q8NFJ9 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
BBS1Q8NFJ9 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.27□□□□□ -0.44
BBS1Q8NFJ9 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 FARS2-201ENST00000274680 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 AC022210.1-201ENST00000449856 793 ntBASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 SERPINA13P-202ENST00000478994 924 ntBASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 MARK2P5-201ENST00000507649 634 ntBASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 AC005740.2-201ENST00000511085 419 ntBASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 HILS1-202ENST00000545329 423 ntBASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 MIR4326-201ENST00000582203 59 ntBASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 AC133552.6-201ENST00000613406 534 ntBASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 AL031587.5-201ENST00000624344 1849 ntBASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 AC106818.1-201ENST00000623223 3242 ntBASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 POM121L4P-202ENST00000427789 1891 ntBASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BBS1Q8NFJ9 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
BBS1Q8NFJ9 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BBS1Q8NFJ9 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
BBS1Q8NFJ9 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC12.26□□□□□ -0.45
BBS1Q8NFJ9 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BBS1Q8NFJ9 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC12.26□□□□□ -0.45
BBS1Q8NFJ9 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BBS1Q8NFJ9 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
BBS1Q8NFJ9 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BBS1Q8NFJ9 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
BBS1Q8NFJ9 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
BBS1Q8NFJ9 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BBS1Q8NFJ9 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC12.26□□□□□ -0.45
BBS1Q8NFJ9 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms