Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SSR1P43307 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSR1P43307 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC14.62□□□□□ -0.07
SSR1P43307 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SSR1P43307 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SSR1P43307 KRT8P43-201ENST00000406052 1458 ntBASIC14.62□□□□□ -0.07
SSR1P43307 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SSR1P43307 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.62□□□□□ -0.07
SSR1P43307 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.62□□□□□ -0.07
SSR1P43307 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SSR1P43307 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
SSR1P43307 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
SSR1P43307 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SSR1P43307 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC14.61□□□□□ -0.07
SSR1P43307 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 Z98885.3-201ENST00000624882 1757 ntBASIC14.61□□□□□ -0.07
SSR1P43307 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SSR1P43307 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.61□□□□□ -0.07
SSR1P43307 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.61□□□□□ -0.07
SSR1P43307 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.61□□□□□ -0.07
SSR1P43307 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.61□□□□□ -0.07
SSR1P43307 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.61□□□□□ -0.07
SSR1P43307 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.61□□□□□ -0.07
SSR1P43307 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.61□□□□□ -0.07
SSR1P43307 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.61□□□□□ -0.07
SSR1P43307 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.61□□□□□ -0.07
SSR1P43307 AP001258.2-201ENST00000529891 490 ntBASIC14.61□□□□□ -0.07
SSR1P43307 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 AC079336.7-201ENST00000623428 1078 ntBASIC14.61□□□□□ -0.07
SSR1P43307 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC14.61□□□□□ -0.07
SSR1P43307 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.61□□□□□ -0.07
SSR1P43307 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC14.61□□□□□ -0.07
SSR1P43307 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
SSR1P43307 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SSR1P43307 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC14.61□□□□□ -0.07
SSR1P43307 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC14.61□□□□□ -0.07
SSR1P43307 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SSR1P43307 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.61□□□□□ -0.07
SSR1P43307 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SSR1P43307 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC14.6□□□□□ -0.07
SSR1P43307 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SSR1P43307 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SSR1P43307 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SSR1P43307 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.6□□□□□ -0.07
SSR1P43307 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SSR1P43307 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
SSR1P43307 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC14.6□□□□□ -0.07
SSR1P43307 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC14.6□□□□□ -0.07
SSR1P43307 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.6□□□□□ -0.07
SSR1P43307 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SSR1P43307 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.6□□□□□ -0.07
SSR1P43307 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.6□□□□□ -0.07
SSR1P43307 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.6□□□□□ -0.07
SSR1P43307 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.6□□□□□ -0.07
SSR1P43307 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.6□□□□□ -0.07
SSR1P43307 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.6□□□□□ -0.07
SSR1P43307 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.6□□□□□ -0.07
SSR1P43307 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.6□□□□□ -0.07
SSR1P43307 AC020914.3-201ENST00000594712 304 ntBASIC14.6□□□□□ -0.07
SSR1P43307 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.6□□□□□ -0.07
SSR1P43307 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR1P43307 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms