Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
CLCN1P35523 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CLCN1P35523 TMEM185A-210ENST00000613273 1913 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLCN1P35523 DDB2-201ENST00000256996 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN1P35523 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN1P35523 ANKDD1A-201ENST00000319580 3110 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CLCN1P35523 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN1P35523 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN1P35523 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN1P35523 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CLCN1P35523 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN1P35523 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CLCN1P35523 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CLCN1P35523 TRPC7-203ENST00000502753 2424 ntTSL 5 BASIC15.54■□□□□ 0.08
CLCN1P35523 ATP2C2-201ENST00000262429 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN1P35523 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC15.54■□□□□ 0.08
CLCN1P35523 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN1P35523 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.54■□□□□ 0.08
CLCN1P35523 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
CLCN1P35523 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.54■□□□□ 0.08
CLCN1P35523 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN1P35523 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN1P35523 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.54■□□□□ 0.08
CLCN1P35523 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.54■□□□□ 0.08
CLCN1P35523 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CLCN1P35523 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.54■□□□□ 0.08
CLCN1P35523 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CLCN1P35523 MIR4741-201ENST00000579822 90 ntBASIC15.54■□□□□ 0.08
CLCN1P35523 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CLCN1P35523 MIR6720-201ENST00000611664 98 ntBASIC15.54■□□□□ 0.08
CLCN1P35523 Z98259.2-201ENST00000641583 609 ntBASIC15.54■□□□□ 0.08
CLCN1P35523 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN1P35523 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN1P35523 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CLCN1P35523 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CLCN1P35523 IL9RP3-201ENST00000442856 1674 ntBASIC15.54■□□□□ 0.08
CLCN1P35523 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC15.54■□□□□ 0.08
CLCN1P35523 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN1P35523 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLCN1P35523 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CLCN1P35523 IL1R2-201ENST00000332549 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CLCN1P35523 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN1P35523 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 TP53TG3B-201ENST00000341305 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.53■□□□□ 0.08
CLCN1P35523 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN1P35523 TMEM200A-201ENST00000296978 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN1P35523 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN1P35523 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 ACOX3-201ENST00000356406 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 CLK3-201ENST00000345005 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN1P35523 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN1P35523 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN1P35523 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN1P35523 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.53■□□□□ 0.08
CLCN1P35523 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.53■□□□□ 0.08
CLCN1P35523 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC15.53■□□□□ 0.08
CLCN1P35523 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.53■□□□□ 0.08
CLCN1P35523 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC15.53■□□□□ 0.08
CLCN1P35523 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.53■□□□□ 0.08
CLCN1P35523 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN1P35523 AC244157.2-201ENST00000616239 1006 ntBASIC15.53■□□□□ 0.08
CLCN1P35523 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN1P35523 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN1P35523 AC015909.3-201ENST00000572855 1794 ntBASIC15.53■□□□□ 0.08
CLCN1P35523 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CLCN1P35523 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 PLAGL1-209ENST00000444202 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CLCN1P35523 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN1P35523 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 SMARCAL1-201ENST00000357276 3271 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
CLCN1P35523 REXO1L6P-201ENST00000603433 1515 ntBASIC15.53■□□□□ 0.08
CLCN1P35523 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CLCN1P35523 CICP9-201ENST00000444451 1913 ntBASIC15.53■□□□□ 0.08
CLCN1P35523 AC104590.1-202ENST00000558368 1921 ntBASIC15.53■□□□□ 0.08
CLCN1P35523 SPATA31C1-202ENST00000602681 1927 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCN1P35523 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCN1P35523 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN1P35523 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CLCN1P35523 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms