Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
USP6P35125 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP6P35125 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USP6P35125 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP6P35125 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USP6P35125 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USP6P35125 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP6P35125 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP6P35125 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC17.83■□□□□ 0.44
USP6P35125 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC17.83■□□□□ 0.44
USP6P35125 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP6P35125 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
USP6P35125 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP6P35125 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USP6P35125 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
USP6P35125 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.83■□□□□ 0.44
USP6P35125 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP6P35125 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP6P35125 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
USP6P35125 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
USP6P35125 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
USP6P35125 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
USP6P35125 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC17.82■□□□□ 0.44
USP6P35125 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
USP6P35125 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC17.82■□□□□ 0.44
USP6P35125 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC17.82■□□□□ 0.44
USP6P35125 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC17.82■□□□□ 0.44
USP6P35125 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC17.82■□□□□ 0.44
USP6P35125 RN7SL16P-201ENST00000476316 269 ntBASIC17.82■□□□□ 0.44
USP6P35125 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
USP6P35125 NUP210P2-201ENST00000510577 282 ntBASIC17.82■□□□□ 0.44
USP6P35125 AC090820.1-201ENST00000519722 591 ntBASIC17.82■□□□□ 0.44
USP6P35125 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
USP6P35125 RN7SL300P-201ENST00000582522 318 ntBASIC17.82■□□□□ 0.44
USP6P35125 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC17.82■□□□□ 0.44
USP6P35125 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC17.82■□□□□ 0.44
USP6P35125 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC17.82■□□□□ 0.44
USP6P35125 LINGO1-AS1-201ENST00000558691 1720 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 AC090403.1-201ENST00000584546 1352 ntTSL 2 BASIC17.82■□□□□ 0.44
USP6P35125 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 PCDHB19P-202ENST00000625133 2914 ntBASIC17.82■□□□□ 0.44
USP6P35125 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC17.82■□□□□ 0.44
USP6P35125 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
USP6P35125 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
USP6P35125 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.82■□□□□ 0.44
USP6P35125 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
USP6P35125 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 AL359881.3-201ENST00000602640 1721 ntBASIC17.82■□□□□ 0.44
USP6P35125 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP6P35125 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6P35125 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6P35125 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.81■□□□□ 0.44
USP6P35125 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6P35125 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6P35125 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
USP6P35125 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
USP6P35125 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP6P35125 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC17.81■□□□□ 0.44
USP6P35125 Z84721.1-201ENST00000438841 372 ntBASIC17.81■□□□□ 0.44
USP6P35125 AC116347.1-201ENST00000442824 720 ntBASIC17.81■□□□□ 0.44
USP6P35125 RN7SL452P-201ENST00000482923 291 ntBASIC17.81■□□□□ 0.44
USP6P35125 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC17.81■□□□□ 0.44
USP6P35125 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC17.81■□□□□ 0.44
USP6P35125 AL139353.1-202ENST00000547378 474 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
USP6P35125 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC17.81■□□□□ 0.44
USP6P35125 TPST2P1-201ENST00000564073 1102 ntBASIC17.81■□□□□ 0.44
USP6P35125 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC17.81■□□□□ 0.44
USP6P35125 AL109983.1-201ENST00000603234 646 ntBASIC17.81■□□□□ 0.44
USP6P35125 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC17.81■□□□□ 0.44
USP6P35125 AL160287.1-203ENST00000637960 1061 ntBASIC17.81■□□□□ 0.44
USP6P35125 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6P35125 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.81■□□□□ 0.44
USP6P35125 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
USP6P35125 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP6P35125 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USP6P35125 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC17.81■□□□□ 0.44
USP6P35125 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms