Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 PCDHB18P-202ENST00000526308 3197 ntBASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SHKBP1Q8TBC3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHKBP1Q8TBC3 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.27□□□□□ -0.12
SHKBP1Q8TBC3 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHKBP1Q8TBC3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHKBP1Q8TBC3 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SHKBP1Q8TBC3 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.27□□□□□ -0.12
SHKBP1Q8TBC3 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHKBP1Q8TBC3 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SHKBP1Q8TBC3 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
SHKBP1Q8TBC3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHKBP1Q8TBC3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
SHKBP1Q8TBC3 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.27□□□□□ -0.12
SHKBP1Q8TBC3 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SHKBP1Q8TBC3 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SHKBP1Q8TBC3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SHKBP1Q8TBC3 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC14.27□□□□□ -0.12
SHKBP1Q8TBC3 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SHKBP1Q8TBC3 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.27□□□□□ -0.12
SHKBP1Q8TBC3 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SHKBP1Q8TBC3 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC14.27□□□□□ -0.12
SHKBP1Q8TBC3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 AF274858.1-201ENST00000406288 372 ntBASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 SERF2-206ENST00000409291 807 ntTSL 3 BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 ZNF877P-201ENST00000437614 612 ntBASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 VDAC1P11-201ENST00000458323 852 ntBASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 IGHEP2-201ENST00000519308 1256 ntBASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 GGNBP1-204ENST00000613113 887 ntBASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 CR392039.2-201ENST00000623182 509 ntBASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 AC020763.3-201ENST00000625095 2904 ntBASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SHKBP1Q8TBC3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 KRT8P42-201ENST00000405771 1399 ntBASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 HLA-DMA-202ENST00000395303 1007 ntBASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 IFNWP2-201ENST00000431203 580 ntBASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 RPSAP12-201ENST00000435879 888 ntBASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 AC005077.3-201ENST00000449614 213 ntBASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 RN7SL605P-201ENST00000577229 281 ntBASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 AC132812.1-201ENST00000583145 892 ntBASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SHKBP1Q8TBC3 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms