Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 NRADDP-202ENST00000641269 1585 ntBASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 AC040160.2-201ENST00000623816 1675 ntBASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC50Q8IVM0 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 AC005722.1-201ENST00000431878 964 ntBASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 AC090857.1-201ENST00000527400 390 ntBASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 AC026740.1-201ENST00000607068 791 ntBASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 AGGF1P10-201ENST00000635005 2191 ntBASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC50Q8IVM0 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms