Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 FTO-214ENST00000636218 2227 ntTSL 5 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 AC012531.1-201ENST00000562848 2680 ntBASIC16.7■□□□□ 0.26
RC3H1Q5TC82 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RC3H1Q5TC82 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 PRY-201ENST00000303728 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 PRY2-201ENST00000303804 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 RPS6-201ENST00000315377 863 ntTSL 3 BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 TPI1P3-201ENST00000335020 740 ntBASIC16.69■□□□□ 0.26
RC3H1Q5TC82 PRYP3-201ENST00000343584 1063 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 OBP2A-203ENST00000371776 689 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 AC004884.1-201ENST00000393647 319 ntBASIC16.69■□□□□ 0.26
RC3H1Q5TC82 AC131235.2-201ENST00000445553 1057 ntBASIC16.69■□□□□ 0.26
RC3H1Q5TC82 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 DIS3L2P1-201ENST00000509197 559 ntBASIC16.69■□□□□ 0.26
RC3H1Q5TC82 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 AC009779.7-201ENST00000609031 469 ntBASIC16.69■□□□□ 0.26
RC3H1Q5TC82 LINC02340-202ENST00000620494 573 ntTSL 4 BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 HNRNPLP1-201ENST00000421896 1501 ntBASIC16.69■□□□□ 0.26
RC3H1Q5TC82 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 AL365181.3-201ENST00000605886 3222 ntBASIC16.69■□□□□ 0.26
RC3H1Q5TC82 APTX-201ENST00000309615 1859 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RC3H1Q5TC82 EGLN3-205ENST00000547327 2849 ntBASIC16.69■□□□□ 0.26
RC3H1Q5TC82 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 KRT18P40-201ENST00000599859 1571 ntBASIC16.68■□□□□ 0.26
RC3H1Q5TC82 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 NFATC4-212ENST00000554473 1382 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 AL078621.2-201ENST00000419351 698 ntBASIC16.68■□□□□ 0.26
RC3H1Q5TC82 FTLP3-201ENST00000427242 528 ntBASIC16.68■□□□□ 0.26
RC3H1Q5TC82 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 AL137779.3-201ENST00000553295 729 ntBASIC16.68■□□□□ 0.26
RC3H1Q5TC82 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 AC090093.1-201ENST00000611315 271 ntBASIC16.68■□□□□ 0.26
RC3H1Q5TC82 AL158032.2-201ENST00000616818 195 ntBASIC16.68■□□□□ 0.26
RC3H1Q5TC82 AC020763.2-201ENST00000623155 1255 ntBASIC16.68■□□□□ 0.26
RC3H1Q5TC82 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 AC008040.5-201ENST00000599781 1781 ntBASIC16.68■□□□□ 0.26
RC3H1Q5TC82 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
RC3H1Q5TC82 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms