Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC16.91■□□□□ 0.3
COL15A1P39059 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC16.91■□□□□ 0.3
COL15A1P39059 AC010395.2-201ENST00000509899 904 ntBASIC16.91■□□□□ 0.3
COL15A1P39059 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COL15A1P39059 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC16.91■□□□□ 0.3
COL15A1P39059 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
COL15A1P39059 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC16.91■□□□□ 0.3
COL15A1P39059 AC117500.5-201ENST00000623233 527 ntBASIC16.91■□□□□ 0.3
COL15A1P39059 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
COL15A1P39059 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
COL15A1P39059 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC16.91■□□□□ 0.3
COL15A1P39059 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 POM121L4P-202ENST00000427789 1891 ntBASIC16.91■□□□□ 0.3
COL15A1P39059 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC16.91■□□□□ 0.3
COL15A1P39059 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 AGAP12P-201ENST00000585227 2359 ntBASIC16.91■□□□□ 0.3
COL15A1P39059 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
COL15A1P39059 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
COL15A1P39059 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC16.91■□□□□ 0.3
COL15A1P39059 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
COL15A1P39059 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.91■□□□□ 0.3
COL15A1P39059 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC16.91■□□□□ 0.3
COL15A1P39059 AC007336.3-201ENST00000623886 2160 ntBASIC16.91■□□□□ 0.3
COL15A1P39059 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL15A1P39059 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC16.91■□□□□ 0.3
COL15A1P39059 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL15A1P39059 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL15A1P39059 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
COL15A1P39059 CASP2-203ENST00000392925 616 ntTSL 3 BASIC16.9■□□□□ 0.3
COL15A1P39059 SERF2-205ENST00000403425 690 ntTSL 2 BASIC16.9■□□□□ 0.3
COL15A1P39059 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC16.9■□□□□ 0.3
COL15A1P39059 PRDX2P3-201ENST00000515779 586 ntBASIC16.9■□□□□ 0.3
COL15A1P39059 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC16.9■□□□□ 0.3
COL15A1P39059 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC16.9■□□□□ 0.3
COL15A1P39059 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC16.9■□□□□ 0.3
COL15A1P39059 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC16.9■□□□□ 0.3
COL15A1P39059 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC16.9■□□□□ 0.3
COL15A1P39059 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC16.9■□□□□ 0.3
COL15A1P39059 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
COL15A1P39059 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL15A1P39059 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL15A1P39059 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL15A1P39059 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
COL15A1P39059 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC16.9■□□□□ 0.3
COL15A1P39059 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
COL15A1P39059 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC16.9■□□□□ 0.3
COL15A1P39059 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL15A1P39059 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.9■□□□□ 0.3
COL15A1P39059 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL15A1P39059 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
COL15A1P39059 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
COL15A1P39059 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
COL15A1P39059 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL15A1P39059 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC16.9■□□□□ 0.3
COL15A1P39059 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC16.9■□□□□ 0.3
COL15A1P39059 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL15A1P39059 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL15A1P39059 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL15A1P39059 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.9■□□□□ 0.3
COL15A1P39059 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC16.9■□□□□ 0.3
COL15A1P39059 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC16.9■□□□□ 0.3
COL15A1P39059 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL15A1P39059 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
COL15A1P39059 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL15A1P39059 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
COL15A1P39059 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.3
COL15A1P39059 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC16.89■□□□□ 0.3
COL15A1P39059 AC010677.1-201ENST00000441690 412 ntBASIC16.89■□□□□ 0.3
COL15A1P39059 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC16.89■□□□□ 0.3
COL15A1P39059 AC067942.1-202ENST00000471756 1057 ntBASIC16.89■□□□□ 0.3
COL15A1P39059 RN7SL2-201ENST00000490232 300 ntBASIC16.89■□□□□ 0.3
COL15A1P39059 AL450346.2-201ENST00000495602 1024 ntBASIC16.89■□□□□ 0.3
COL15A1P39059 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC16.89■□□□□ 0.3
COL15A1P39059 RN7SL4P-201ENST00000584058 295 ntBASIC16.89■□□□□ 0.3
COL15A1P39059 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.3
COL15A1P39059 AL137028.2-201ENST00000614601 256 ntBASIC16.89■□□□□ 0.3
COL15A1P39059 MFSD12-215ENST00000615613 688 ntBASIC16.89■□□□□ 0.3
COL15A1P39059 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
COL15A1P39059 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC16.89■□□□□ 0.3
COL15A1P39059 AC124319.4-201ENST00000622931 2161 ntBASIC16.89■□□□□ 0.3
COL15A1P39059 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
COL15A1P39059 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
COL15A1P39059 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC16.89■□□□□ 0.29
COL15A1P39059 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms