Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.01□□□□□ -0.49
NPIPB4C9JG80 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
NPIPB4C9JG80 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
NPIPB4C9JG80 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.01□□□□□ -0.49
NPIPB4C9JG80 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
NPIPB4C9JG80 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPB4C9JG80 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPB4C9JG80 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC12.01□□□□□ -0.49
NPIPB4C9JG80 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.01□□□□□ -0.49
NPIPB4C9JG80 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
NPIPB4C9JG80 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
NPIPB4C9JG80 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12□□□□□ -0.49
NPIPB4C9JG80 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC12□□□□□ -0.49
NPIPB4C9JG80 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC12□□□□□ -0.49
NPIPB4C9JG80 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC12□□□□□ -0.49
NPIPB4C9JG80 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
NPIPB4C9JG80 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12□□□□□ -0.49
NPIPB4C9JG80 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12□□□□□ -0.49
NPIPB4C9JG80 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12□□□□□ -0.49
NPIPB4C9JG80 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC12□□□□□ -0.49
NPIPB4C9JG80 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
NPIPB4C9JG80 LINP1-201ENST00000417112 917 ntTSL 2 BASIC12□□□□□ -0.49
NPIPB4C9JG80 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12□□□□□ -0.49
NPIPB4C9JG80 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12□□□□□ -0.49
NPIPB4C9JG80 SRP19-206ENST00000515463 660 ntTSL 3 BASIC12□□□□□ -0.49
NPIPB4C9JG80 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
NPIPB4C9JG80 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12□□□□□ -0.49
NPIPB4C9JG80 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
NPIPB4C9JG80 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12□□□□□ -0.49
NPIPB4C9JG80 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12□□□□□ -0.49
NPIPB4C9JG80 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12□□□□□ -0.49
NPIPB4C9JG80 NT5C-204ENST00000578337 582 ntTSL 2 BASIC12□□□□□ -0.49
NPIPB4C9JG80 NUDT4P2-201ENST00000578341 546 ntBASIC12□□□□□ -0.49
NPIPB4C9JG80 RN7SL134P-201ENST00000579756 303 ntBASIC12□□□□□ -0.49
NPIPB4C9JG80 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12□□□□□ -0.49
NPIPB4C9JG80 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 LINC00643-207ENST00000637212 734 ntBASIC12□□□□□ -0.49
NPIPB4C9JG80 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC12□□□□□ -0.49
NPIPB4C9JG80 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 Z82170.1-201ENST00000625081 3192 ntBASIC12□□□□□ -0.49
NPIPB4C9JG80 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12□□□□□ -0.49
NPIPB4C9JG80 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
NPIPB4C9JG80 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12□□□□□ -0.49
NPIPB4C9JG80 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 KRT8P19-201ENST00000551916 1455 ntBASIC12□□□□□ -0.49
NPIPB4C9JG80 ZSCAN5DP-201ENST00000600684 1488 ntBASIC12□□□□□ -0.49
NPIPB4C9JG80 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
NPIPB4C9JG80 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 AC073862.3-201ENST00000624597 1648 ntBASIC12□□□□□ -0.49
NPIPB4C9JG80 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC12□□□□□ -0.49
NPIPB4C9JG80 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
NPIPB4C9JG80 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12□□□□□ -0.49
NPIPB4C9JG80 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
NPIPB4C9JG80 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NPIPB4C9JG80 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 AC091181.1-201ENST00000623762 2098 ntBASIC11.99□□□□□ -0.49
NPIPB4C9JG80 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 CICP20-201ENST00000443330 2801 ntBASIC11.99□□□□□ -0.49
NPIPB4C9JG80 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 AC091046.1-201ENST00000331871 207 ntBASIC11.99□□□□□ -0.49
NPIPB4C9JG80 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 AP000356.3-201ENST00000382243 753 ntBASIC11.99□□□□□ -0.49
NPIPB4C9JG80 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC11.99□□□□□ -0.49
NPIPB4C9JG80 AL354861.1-201ENST00000445213 355 ntBASIC11.99□□□□□ -0.49
NPIPB4C9JG80 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms