Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 AGGF1P10-201ENST00000635005 2191 ntBASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 AF013593.1-201ENST00000458074 1487 ntBASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC10.36□□□□□ -0.75
HLA-DRB4X5D2U9 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 FAM90A11P-201ENST00000518378 2218 ntBASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 SAT1-201ENST00000379251 801 ntTSL 2 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 SAT1-202ENST00000379253 909 ntTSL 2 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 SAT1-203ENST00000379254 868 ntTSL 3 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 AL583805.1-201ENST00000391389 531 ntBASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 AP000358.1-201ENST00000456260 156 ntBASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 NUP210P1-202ENST00000504322 710 ntBASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 AC242376.1-201ENST00000559033 726 ntBASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 AC026803.1-201ENST00000569130 274 ntBASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 RN7SL665P-201ENST00000578793 300 ntBASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 MIR3619-201ENST00000579667 83 ntBASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 AC007326.1-201ENST00000604539 458 ntBASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 AL353770.1-201ENST00000614915 403 ntBASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 CU633904.3-201ENST00000624042 1029 ntBASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HLA-DRB4X5D2U9 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms