Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S1Q92572 ENTPD3-203ENST00000445129 1658 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S1Q92572 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S1Q92572 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S1Q92572 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
AP3S1Q92572 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 LPP-AS2-201ENST00000605573 2852 ntBASIC12.04□□□□□ -0.48
AP3S1Q92572 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
AP3S1Q92572 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
AP3S1Q92572 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.04□□□□□ -0.48
AP3S1Q92572 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.04□□□□□ -0.48
AP3S1Q92572 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.04□□□□□ -0.48
AP3S1Q92572 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.04□□□□□ -0.48
AP3S1Q92572 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.04□□□□□ -0.48
AP3S1Q92572 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.04□□□□□ -0.48
AP3S1Q92572 CHCHD2P2-201ENST00000503744 321 ntBASIC12.04□□□□□ -0.48
AP3S1Q92572 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S1Q92572 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S1Q92572 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S1Q92572 AC132938.4-201ENST00000623835 848 ntBASIC12.04□□□□□ -0.48
AP3S1Q92572 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 DNAI2-201ENST00000311014 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
AP3S1Q92572 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S1Q92572 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S1Q92572 AC243964.3-201ENST00000623022 2028 ntBASIC12.04□□□□□ -0.48
AP3S1Q92572 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.04□□□□□ -0.48
AP3S1Q92572 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S1Q92572 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 PLEKHG4-204ENST00000427155 4455 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
AP3S1Q92572 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
AP3S1Q92572 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
AP3S1Q92572 AC005154.3-201ENST00000419639 1393 ntBASIC12.04□□□□□ -0.48
AP3S1Q92572 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.04□□□□□ -0.48
AP3S1Q92572 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.04□□□□□ -0.48
AP3S1Q92572 MIR22HG-208ENST00000574306 2626 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.04□□□□□ -0.48
AP3S1Q92572 CICP19-201ENST00000632944 2357 ntBASIC12.04□□□□□ -0.48
AP3S1Q92572 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AP3S1Q92572 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
AP3S1Q92572 PKP4P1-201ENST00000426801 2158 ntBASIC12.03□□□□□ -0.48
AP3S1Q92572 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
AP3S1Q92572 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
AP3S1Q92572 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
AP3S1Q92572 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC12.03□□□□□ -0.48
AP3S1Q92572 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
AP3S1Q92572 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.03□□□□□ -0.48
AP3S1Q92572 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC12.03□□□□□ -0.48
AP3S1Q92572 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC12.03□□□□□ -0.48
AP3S1Q92572 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.03□□□□□ -0.48
AP3S1Q92572 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.03□□□□□ -0.48
AP3S1Q92572 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.03□□□□□ -0.48
AP3S1Q92572 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
AP3S1Q92572 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
AP3S1Q92572 AC112492.5-201ENST00000421897 457 ntBASIC12.03□□□□□ -0.48
AP3S1Q92572 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S1Q92572 POM121L10P-201ENST00000436994 1285 ntBASIC12.03□□□□□ -0.48
AP3S1Q92572 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.03□□□□□ -0.48
AP3S1Q92572 AC102953.1-201ENST00000445345 498 ntTSL 2 BASIC12.03□□□□□ -0.48
AP3S1Q92572 AC012441.1-201ENST00000446669 685 ntBASIC12.03□□□□□ -0.48
AP3S1Q92572 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
AP3S1Q92572 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.03□□□□□ -0.48
AP3S1Q92572 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.03□□□□□ -0.48
AP3S1Q92572 AP003171.2-201ENST00000528208 925 ntBASIC12.03□□□□□ -0.48
AP3S1Q92572 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.03□□□□□ -0.48
AP3S1Q92572 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms