Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCA4P51532 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC23.21■■□□□ 1.31
SMARCA4P51532 AP003170.2-201ENST00000544730 786 ntBASIC23.21■■□□□ 1.31
SMARCA4P51532 KRT18P7-201ENST00000557241 1219 ntBASIC23.21■■□□□ 1.31
SMARCA4P51532 PRKN-210ENST00000612540 603 ntTSL 5 BASIC23.21■■□□□ 1.31
SMARCA4P51532 AC127526.5-201ENST00000637148 1110 ntBASIC23.21■■□□□ 1.31
SMARCA4P51532 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCA4P51532 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCA4P51532 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCA4P51532 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
SMARCA4P51532 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC23.2■■□□□ 1.31
SMARCA4P51532 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC23.2■■□□□ 1.31
SMARCA4P51532 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC23.2■■□□□ 1.31
SMARCA4P51532 CCRL2-202ENST00000399036 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
SMARCA4P51532 PRKAG1-201ENST00000316299 1683 ntTSL 2 BASIC23.2■■□□□ 1.3
SMARCA4P51532 SERF1A-209ENST00000513436 1693 ntTSL 3 BASIC23.2■■□□□ 1.3
SMARCA4P51532 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCA4P51532 OR4C6-201ENST00000314259 1020 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
SMARCA4P51532 RPSAP46-201ENST00000428316 882 ntBASIC23.2■■□□□ 1.3
SMARCA4P51532 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC23.2■■□□□ 1.3
SMARCA4P51532 RPSAP19-201ENST00000431241 880 ntBASIC23.2■■□□□ 1.3
SMARCA4P51532 IQCF5-201ENST00000446461 512 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
SMARCA4P51532 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC23.2■■□□□ 1.3
SMARCA4P51532 AC007728.3-201ENST00000602304 746 ntBASIC23.2■■□□□ 1.3
SMARCA4P51532 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC23.2■■□□□ 1.3
SMARCA4P51532 PRSS2-206ENST00000633969 852 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCA4P51532 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC23.2■■□□□ 1.3
SMARCA4P51532 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
SMARCA4P51532 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
SMARCA4P51532 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC23.2■■□□□ 1.3
SMARCA4P51532 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCA4P51532 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC23.2■■□□□ 1.3
SMARCA4P51532 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCA4P51532 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCA4P51532 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCA4P51532 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCA4P51532 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCA4P51532 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCA4P51532 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC23.19■■□□□ 1.3
SMARCA4P51532 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SMARCA4P51532 LINC02140-202ENST00000566649 2017 ntTSL 2 BASIC23.19■■□□□ 1.3
SMARCA4P51532 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC23.19■■□□□ 1.3
SMARCA4P51532 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCA4P51532 MIR1249-201ENST00000408671 66 ntBASIC23.19■■□□□ 1.3
SMARCA4P51532 TRIAP1-202ENST00000546954 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCA4P51532 TSHZ3-202ENST00000558569 441 ntTSL 2 BASIC23.19■■□□□ 1.3
SMARCA4P51532 AC084064.1-201ENST00000569938 419 ntTSL 2 BASIC23.19■■□□□ 1.3
SMARCA4P51532 FP671120.4-201ENST00000629969 923 ntBASIC23.19■■□□□ 1.3
SMARCA4P51532 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCA4P51532 AC106799.1-201ENST00000503188 1676 ntTSL 2 BASIC23.19■■□□□ 1.3
SMARCA4P51532 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
SMARCA4P51532 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCA4P51532 AC011474.4-201ENST00000623523 2076 ntBASIC23.19■■□□□ 1.3
SMARCA4P51532 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCA4P51532 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC23.19■■□□□ 1.3
SMARCA4P51532 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCA4P51532 DDX12P-201ENST00000432996 2947 ntBASIC23.19■■□□□ 1.3
SMARCA4P51532 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCA4P51532 HAMP-201ENST00000222304 558 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCA4P51532 TBC1D3P3-201ENST00000342824 1080 ntBASIC23.19■■□□□ 1.3
SMARCA4P51532 NRSN1-201ENST00000378475 800 ntTSL 3 BASIC23.19■■□□□ 1.3
SMARCA4P51532 KRT41P-201ENST00000393988 1293 ntBASIC23.19■■□□□ 1.3
SMARCA4P51532 TGIF2P1-201ENST00000435390 685 ntBASIC23.19■■□□□ 1.3
SMARCA4P51532 AC113340.1-201ENST00000475257 636 ntBASIC23.19■■□□□ 1.3
SMARCA4P51532 AC022239.3-201ENST00000528629 544 ntTSL 4 BASIC23.19■■□□□ 1.3
SMARCA4P51532 AC019254.1-202ENST00000558515 645 ntTSL 3 BASIC23.19■■□□□ 1.3
SMARCA4P51532 KXD1-210ENST00000599000 498 ntTSL 2 BASIC23.19■■□□□ 1.3
SMARCA4P51532 LINC01206-212ENST00000609168 988 ntTSL 5 BASIC23.19■■□□□ 1.3
SMARCA4P51532 BID-211ENST00000611040 419 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCA4P51532 AP000892.2-201ENST00000613535 324 ntBASIC23.19■■□□□ 1.3
SMARCA4P51532 PRSS2-205ENST00000632998 817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCA4P51532 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SMARCA4P51532 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCA4P51532 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCA4P51532 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCA4P51532 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCA4P51532 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC23.18■■□□□ 1.3
SMARCA4P51532 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SMARCA4P51532 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCA4P51532 POLR1C-202ENST00000372344 1119 ntTSL 5 BASIC23.18■■□□□ 1.3
SMARCA4P51532 DMKN-202ENST00000392206 458 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SMARCA4P51532 AC003101.1-201ENST00000412403 459 ntTSL 3 BASIC23.18■■□□□ 1.3
SMARCA4P51532 OR7E33P-201ENST00000437705 966 ntBASIC23.18■■□□□ 1.3
SMARCA4P51532 OR7E26P-201ENST00000502808 1006 ntBASIC23.18■■□□□ 1.3
SMARCA4P51532 SAP30L-AS1-202ENST00000519727 396 ntTSL 3 BASIC23.18■■□□□ 1.3
SMARCA4P51532 AL356423.1-201ENST00000604953 538 ntBASIC23.18■■□□□ 1.3
SMARCA4P51532 AC064862.6-203ENST00000605139 691 ntTSL 5 BASIC23.18■■□□□ 1.3
SMARCA4P51532 MDM1-204ENST00000411698 2472 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SMARCA4P51532 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCA4P51532 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCA4P51532 RGPD4-AS1-202ENST00000457647 1792 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCA4P51532 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCA4P51532 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC23.17■■□□□ 1.3
SMARCA4P51532 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC23.17■■□□□ 1.3
SMARCA4P51532 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC23.17■■□□□ 1.3
SMARCA4P51532 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCA4P51532 DDC-206ENST00000431062 1620 ntTSL 5 BASIC23.17■■□□□ 1.3
SMARCA4P51532 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SMARCA4P51532 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SMARCA4P51532 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms