Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ATRXP46100 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC12.28□□□□□ -0.44
ATRXP46100 AC020763.2-201ENST00000623155 1255 ntBASIC12.28□□□□□ -0.44
ATRXP46100 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC12.28□□□□□ -0.44
ATRXP46100 EGLN3-205ENST00000547327 2849 ntBASIC12.28□□□□□ -0.44
ATRXP46100 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ATRXP46100 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ATRXP46100 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
ATRXP46100 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ATRXP46100 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.28□□□□□ -0.44
ATRXP46100 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ATRXP46100 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ATRXP46100 SYNGAP1-207ENST00000628646 4264 ntTSL 5 BASIC12.28□□□□□ -0.44
ATRXP46100 CD9-212ENST00000610354 1315 ntTSL 5 BASIC12.28□□□□□ -0.44
ATRXP46100 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ATRXP46100 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ATRXP46100 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ATRXP46100 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
ATRXP46100 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.28□□□□□ -0.44
ATRXP46100 NRADDP-202ENST00000641269 1585 ntBASIC12.28□□□□□ -0.44
ATRXP46100 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ATRXP46100 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
ATRXP46100 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
ATRXP46100 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
ATRXP46100 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ATRXP46100 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ATRXP46100 TMEM176A-201ENST00000004103 1261 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ATRXP46100 HMGN1P4-201ENST00000419500 290 ntBASIC12.28□□□□□ -0.44
ATRXP46100 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ATRXP46100 AC116347.1-201ENST00000442824 720 ntBASIC12.28□□□□□ -0.44
ATRXP46100 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC12.28□□□□□ -0.44
ATRXP46100 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ATRXP46100 AC233724.7-201ENST00000511476 253 ntBASIC12.28□□□□□ -0.44
ATRXP46100 AC103740.2-201ENST00000557900 1225 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ATRXP46100 MESTP2-201ENST00000559787 889 ntBASIC12.28□□□□□ -0.44
ATRXP46100 CYP4F10P-201ENST00000589560 752 ntBASIC12.28□□□□□ -0.44
ATRXP46100 ATXN10-212ENST00000640901 1185 ntTSL 5 BASIC12.28□□□□□ -0.44
ATRXP46100 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ATRXP46100 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
ATRXP46100 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.28□□□□□ -0.44
ATRXP46100 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.28□□□□□ -0.44
ATRXP46100 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.28□□□□□ -0.44
ATRXP46100 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.28□□□□□ -0.44
ATRXP46100 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ATRXP46100 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ATRXP46100 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ATRXP46100 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ATRXP46100 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.44
ATRXP46100 CICP14-201ENST00000629111 2732 ntBASIC12.27□□□□□ -0.44
ATRXP46100 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ATRXP46100 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.27□□□□□ -0.44
ATRXP46100 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ATRXP46100 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
ATRXP46100 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.44
ATRXP46100 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.27□□□□□ -0.44
ATRXP46100 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
ATRXP46100 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
ATRXP46100 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ATRXP46100 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
ATRXP46100 SNORA30.1-201ENST00000363193 129 ntBASIC12.27□□□□□ -0.45
ATRXP46100 IQCF6-201ENST00000398780 446 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
ATRXP46100 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC12.27□□□□□ -0.45
ATRXP46100 AL445070.1-201ENST00000414631 714 ntTSL 3 BASIC12.27□□□□□ -0.45
ATRXP46100 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.27□□□□□ -0.45
ATRXP46100 AL139220.1-201ENST00000436802 520 ntBASIC12.27□□□□□ -0.45
ATRXP46100 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC12.27□□□□□ -0.45
ATRXP46100 RN7SL750P-201ENST00000582814 238 ntBASIC12.27□□□□□ -0.45
ATRXP46100 ZNF544-209ENST00000596929 543 ntTSL 4 BASIC12.27□□□□□ -0.45
ATRXP46100 AP003419.3-201ENST00000613900 527 ntTSL 3 BASIC12.27□□□□□ -0.45
ATRXP46100 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
ATRXP46100 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ATRXP46100 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ATRXP46100 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
ATRXP46100 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ATRXP46100 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
ATRXP46100 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ATRXP46100 KLF6-206ENST00000497571 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ATRXP46100 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
ATRXP46100 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.27□□□□□ -0.45
ATRXP46100 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ATRXP46100 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.27□□□□□ -0.45
ATRXP46100 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC12.27□□□□□ -0.45
ATRXP46100 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ATRXP46100 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ATRXP46100 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ATRXP46100 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ATRXP46100 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ATRXP46100 RCC2P5-201ENST00000492126 1487 ntBASIC12.27□□□□□ -0.45
ATRXP46100 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.27□□□□□ -0.45
ATRXP46100 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
ATRXP46100 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ATRXP46100 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.27□□□□□ -0.45
ATRXP46100 SPATA18-201ENST00000295213 4396 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ATRXP46100 PRL-203ENST00000617911 1364 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ATRXP46100 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.27□□□□□ -0.45
ATRXP46100 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ATRXP46100 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ATRXP46100 FAM204A-202ENST00000369172 872 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
ATRXP46100 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC12.27□□□□□ -0.45
ATRXP46100 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms