Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HTR1AP08908 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.47□□□□□ -0.41
HTR1AP08908 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.47□□□□□ -0.41
HTR1AP08908 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.47□□□□□ -0.41
HTR1AP08908 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.47□□□□□ -0.41
HTR1AP08908 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.47□□□□□ -0.41
HTR1AP08908 AC009884.2-201ENST00000603110 324 ntBASIC12.47□□□□□ -0.41
HTR1AP08908 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.47□□□□□ -0.41
HTR1AP08908 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.47□□□□□ -0.41
HTR1AP08908 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.47□□□□□ -0.41
HTR1AP08908 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
HTR1AP08908 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
HTR1AP08908 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HTR1AP08908 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HTR1AP08908 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC12.47□□□□□ -0.41
HTR1AP08908 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HTR1AP08908 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HTR1AP08908 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC12.47□□□□□ -0.41
HTR1AP08908 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
HTR1AP08908 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.47□□□□□ -0.41
HTR1AP08908 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HTR1AP08908 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
HTR1AP08908 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC12.47□□□□□ -0.41
HTR1AP08908 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HTR1AP08908 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HTR1AP08908 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC12.47□□□□□ -0.41
HTR1AP08908 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC12.47□□□□□ -0.41
HTR1AP08908 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
HTR1AP08908 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
HTR1AP08908 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
HTR1AP08908 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HTR1AP08908 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HTR1AP08908 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.47□□□□□ -0.41
HTR1AP08908 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
HTR1AP08908 TSNAXIP1-201ENST00000388833 2429 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
HTR1AP08908 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HTR1AP08908 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HTR1AP08908 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.47□□□□□ -0.41
HTR1AP08908 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HTR1AP08908 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
HTR1AP08908 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
HTR1AP08908 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.46□□□□□ -0.41
HTR1AP08908 TRPV1-204ENST00000425167 2607 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
HTR1AP08908 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
HTR1AP08908 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
HTR1AP08908 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 ZNF221-205ENST00000622072 2102 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
HTR1AP08908 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
HTR1AP08908 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.46□□□□□ -0.41
HTR1AP08908 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 LINC00540-203ENST00000631321 2412 ntTSL 2 BASIC12.46□□□□□ -0.41
HTR1AP08908 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
HTR1AP08908 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.46□□□□□ -0.41
HTR1AP08908 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
HTR1AP08908 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
HTR1AP08908 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
HTR1AP08908 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.46□□□□□ -0.41
HTR1AP08908 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.46□□□□□ -0.41
HTR1AP08908 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.46□□□□□ -0.41
HTR1AP08908 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
HTR1AP08908 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.46□□□□□ -0.41
HTR1AP08908 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 SPCS2P1-201ENST00000561636 679 ntBASIC12.46□□□□□ -0.41
HTR1AP08908 MIR4745-201ENST00000577608 62 ntBASIC12.46□□□□□ -0.41
HTR1AP08908 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.46□□□□□ -0.41
HTR1AP08908 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HTR1AP08908 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC12.46□□□□□ -0.41
HTR1AP08908 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
HTR1AP08908 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
HTR1AP08908 AL031714.1-201ENST00000567829 2926 ntTSL 5 BASIC12.46□□□□□ -0.42
HTR1AP08908 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
HTR1AP08908 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
HTR1AP08908 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.46□□□□□ -0.42
HTR1AP08908 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
HTR1AP08908 FOXD2-AS1-201ENST00000445551 2509 ntBASIC12.46□□□□□ -0.42
HTR1AP08908 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.42
HTR1AP08908 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
HTR1AP08908 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC12.46□□□□□ -0.42
HTR1AP08908 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC12.46□□□□□ -0.42
HTR1AP08908 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms