Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CHL1O00533 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHL1O00533 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CHL1O00533 RBM4-207ENST00000506523 654 ntTSL 3 BASIC17.26■□□□□ 0.35
CHL1O00533 DNM1P51-201ENST00000558149 522 ntBASIC17.26■□□□□ 0.35
CHL1O00533 ABHD17AP9-201ENST00000561925 548 ntBASIC17.26■□□□□ 0.35
CHL1O00533 AC123912.6-201ENST00000612657 315 ntBASIC17.26■□□□□ 0.35
CHL1O00533 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHL1O00533 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CHL1O00533 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC17.26■□□□□ 0.35
CHL1O00533 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHL1O00533 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHL1O00533 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHL1O00533 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHL1O00533 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CHL1O00533 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHL1O00533 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHL1O00533 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC17.26■□□□□ 0.35
CHL1O00533 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHL1O00533 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHL1O00533 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHL1O00533 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CHL1O00533 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHL1O00533 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CHL1O00533 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHL1O00533 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHL1O00533 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHL1O00533 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CHL1O00533 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CHL1O00533 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CHL1O00533 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 FAM183BP-201ENST00000409072 1595 ntBASIC17.25■□□□□ 0.35
CHL1O00533 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 PCDHA6-201ENST00000378126 3267 ntBASIC17.25■□□□□ 0.35
CHL1O00533 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CHL1O00533 GH1-203ENST00000351388 685 ntTSL 2 BASIC17.25■□□□□ 0.35
CHL1O00533 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC17.25■□□□□ 0.35
CHL1O00533 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC17.25■□□□□ 0.35
CHL1O00533 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC17.25■□□□□ 0.35
CHL1O00533 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC17.25■□□□□ 0.35
CHL1O00533 HINT1-204ENST00000506908 681 ntTSL 2 BASIC17.25■□□□□ 0.35
CHL1O00533 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC17.25■□□□□ 0.35
CHL1O00533 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC17.25■□□□□ 0.35
CHL1O00533 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC17.25■□□□□ 0.35
CHL1O00533 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC17.25■□□□□ 0.35
CHL1O00533 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC17.25■□□□□ 0.35
CHL1O00533 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC17.25■□□□□ 0.35
CHL1O00533 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC17.25■□□□□ 0.35
CHL1O00533 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHL1O00533 CICP4-201ENST00000447359 2812 ntBASIC17.25■□□□□ 0.35
CHL1O00533 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHL1O00533 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CHL1O00533 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHL1O00533 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHL1O00533 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHL1O00533 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHL1O00533 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHL1O00533 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC17.24■□□□□ 0.35
CHL1O00533 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHL1O00533 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHL1O00533 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHL1O00533 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHL1O00533 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CHL1O00533 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.24■□□□□ 0.35
CHL1O00533 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHL1O00533 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHL1O00533 GGT8P-201ENST00000418938 532 ntBASIC17.24■□□□□ 0.35
CHL1O00533 RPL18AP16-201ENST00000424057 531 ntBASIC17.24■□□□□ 0.35
CHL1O00533 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC17.24■□□□□ 0.35
CHL1O00533 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC17.24■□□□□ 0.35
CHL1O00533 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC17.24■□□□□ 0.35
CHL1O00533 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC17.24■□□□□ 0.35
CHL1O00533 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC17.24■□□□□ 0.35
CHL1O00533 C2orf27AP1-201ENST00000618128 586 ntBASIC17.24■□□□□ 0.35
CHL1O00533 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC17.24■□□□□ 0.35
CHL1O00533 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CHL1O00533 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CHL1O00533 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CHL1O00533 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHL1O00533 DTX2P1-201ENST00000425797 1633 ntBASIC17.24■□□□□ 0.35
CHL1O00533 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CHL1O00533 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms