Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 GULOP-201ENST00000454030 748 ntBASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 TREX1-203ENST00000456089 629 ntTSL 3 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 AC108724.1-201ENST00000481669 352 ntBASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 MIR8071-1-201ENST00000616769 65 ntBASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 MIR8071-2-201ENST00000616772 65 ntBASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CTC1Q2NKJ3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 AL139385.1-201ENST00000611744 3272 ntBASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 FAU-201ENST00000279259 461 ntTSL 2 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 CCL19-202ENST00000378800 414 ntTSL 2 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 MIR611-201ENST00000384869 67 ntBASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 KRT18P33-201ENST00000398525 1043 ntBASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 MED15P3-201ENST00000413613 326 ntBASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 CCND3P1-201ENST00000438347 580 ntBASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 VDAC1P11-201ENST00000458323 852 ntBASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 AC008494.1-201ENST00000497612 796 ntBASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 AC026412.1-206ENST00000502273 206 ntBASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 RPSAP70-201ENST00000504462 864 ntBASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 GRAMD4P6-201ENST00000556999 244 ntBASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 FAM187B2P-201ENST00000577135 713 ntBASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 AL034417.3-201ENST00000641100 1043 ntBASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 SBF1P1-201ENST00000444527 5631 ntBASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CTC1Q2NKJ3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.56□□□□□ -0.08
CTC1Q2NKJ3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms