Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 AC090825.2-201ENST00000557959 739 ntBASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 SNORA50D-202ENST00000627561 132 ntBASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 AC245140.2-201ENST00000624054 1939 ntBASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 AC099063.4-201ENST00000641099 1602 ntBASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.09□□□□□ -0.31
RSPO4Q2I0M5 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
RSPO4Q2I0M5 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.08□□□□□ -0.31
RSPO4Q2I0M5 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RSPO4Q2I0M5 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.08□□□□□ -0.31
RSPO4Q2I0M5 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
RSPO4Q2I0M5 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RSPO4Q2I0M5 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.31
RSPO4Q2I0M5 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RSPO4Q2I0M5 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 HNRNPA1P68-201ENST00000425806 979 ntBASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 CNN2P1-201ENST00000453616 918 ntBASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 AC005011.1-201ENST00000455206 210 ntBASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 AP001505.1-201ENST00000569966 824 ntBASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 RN7SL162P-201ENST00000579233 292 ntBASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 AC090950.1-202ENST00000605733 644 ntBASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 AC068134.4-201ENST00000613365 122 ntBASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 AC099795.2-201ENST00000639582 440 ntBASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 PNLIPRP2-201ENST00000579578 1482 ntAPPRIS P5 TSL 2 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 AC011239.2-201ENST00000624820 1489 ntBASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
RSPO4Q2I0M5 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO4Q2I0M5 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO4Q2I0M5 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.07□□□□□ -0.32
RSPO4Q2I0M5 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO4Q2I0M5 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO4Q2I0M5 USP8-219ENST00000625664 1568 ntTSL 5 BASIC13.07□□□□□ -0.32
RSPO4Q2I0M5 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO4Q2I0M5 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO4Q2I0M5 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO4Q2I0M5 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RSPO4Q2I0M5 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
RSPO4Q2I0M5 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms