Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RFC3P40938 FMO6P-201ENST00000236166 1620 ntBASIC12.59□□□□□ -0.39
RFC3P40938 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.59□□□□□ -0.39
RFC3P40938 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RFC3P40938 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
RFC3P40938 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RFC3P40938 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RFC3P40938 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.58□□□□□ -0.39
RFC3P40938 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RFC3P40938 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
RFC3P40938 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
RFC3P40938 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RFC3P40938 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RFC3P40938 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RFC3P40938 BEND3P3-201ENST00000611030 2440 ntBASIC12.58□□□□□ -0.4
RFC3P40938 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RFC3P40938 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
RFC3P40938 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RFC3P40938 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
RFC3P40938 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RFC3P40938 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC12.58□□□□□ -0.4
RFC3P40938 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RFC3P40938 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC12.58□□□□□ -0.4
RFC3P40938 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC12.58□□□□□ -0.4
RFC3P40938 GCSHP3-201ENST00000431120 391 ntBASIC12.58□□□□□ -0.4
RFC3P40938 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC12.58□□□□□ -0.4
RFC3P40938 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.58□□□□□ -0.4
RFC3P40938 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RFC3P40938 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC12.58□□□□□ -0.4
RFC3P40938 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RFC3P40938 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC12.58□□□□□ -0.4
RFC3P40938 AC073592.2-201ENST00000623062 780 ntBASIC12.58□□□□□ -0.4
RFC3P40938 AL139424.3-202ENST00000641619 917 ntBASIC12.58□□□□□ -0.4
RFC3P40938 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RFC3P40938 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
RFC3P40938 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
RFC3P40938 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
RFC3P40938 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
RFC3P40938 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.58□□□□□ -0.4
RFC3P40938 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RFC3P40938 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RFC3P40938 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RFC3P40938 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RFC3P40938 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RFC3P40938 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RFC3P40938 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
RFC3P40938 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RFC3P40938 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.58□□□□□ -0.4
RFC3P40938 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RFC3P40938 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFC3P40938 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFC3P40938 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
RFC3P40938 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.57□□□□□ -0.4
RFC3P40938 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFC3P40938 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.57□□□□□ -0.4
RFC3P40938 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFC3P40938 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFC3P40938 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
RFC3P40938 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RFC3P40938 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFC3P40938 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RFC3P40938 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.57□□□□□ -0.4
RFC3P40938 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RFC3P40938 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
RFC3P40938 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFC3P40938 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.57□□□□□ -0.4
RFC3P40938 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
RFC3P40938 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC12.57□□□□□ -0.4
RFC3P40938 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.57□□□□□ -0.4
RFC3P40938 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RFC3P40938 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFC3P40938 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFC3P40938 AP000354.1-201ENST00000396982 456 ntBASIC12.57□□□□□ -0.4
RFC3P40938 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
RFC3P40938 AC073210.1-201ENST00000414799 232 ntBASIC12.57□□□□□ -0.4
RFC3P40938 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC12.57□□□□□ -0.4
RFC3P40938 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC12.57□□□□□ -0.4
RFC3P40938 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC12.57□□□□□ -0.4
RFC3P40938 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC12.57□□□□□ -0.4
RFC3P40938 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFC3P40938 AC024293.1-201ENST00000467930 498 ntBASIC12.57□□□□□ -0.4
RFC3P40938 RN7SL351P-201ENST00000469306 248 ntBASIC12.57□□□□□ -0.4
RFC3P40938 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.57□□□□□ -0.4
RFC3P40938 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
RFC3P40938 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC12.57□□□□□ -0.4
RFC3P40938 MT3-202ENST00000561640 514 ntTSL 3 BASIC12.57□□□□□ -0.4
RFC3P40938 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RFC3P40938 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.57□□□□□ -0.4
RFC3P40938 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC12.57□□□□□ -0.4
RFC3P40938 AP005264.6-204ENST00000588436 719 ntBASIC12.57□□□□□ -0.4
RFC3P40938 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.57□□□□□ -0.4
RFC3P40938 AC011247.3-201ENST00000603297 438 ntBASIC12.57□□□□□ -0.4
RFC3P40938 NAMA-206ENST00000605377 509 ntTSL 5 BASIC12.57□□□□□ -0.4
RFC3P40938 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC12.57□□□□□ -0.4
RFC3P40938 FO393412.1-201ENST00000619841 382 ntBASIC12.57□□□□□ -0.4
RFC3P40938 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFC3P40938 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFC3P40938 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RFC3P40938 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RFC3P40938 AP001972.5-201ENST00000624624 2338 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms