Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC11.76□□□□□ -0.53
CD40P25942 CYP4F36P-201ENST00000589193 186 ntBASIC11.76□□□□□ -0.53
CD40P25942 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC11.76□□□□□ -0.53
CD40P25942 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC11.76□□□□□ -0.53
CD40P25942 AC005274.1-201ENST00000623460 802 ntBASIC11.76□□□□□ -0.53
CD40P25942 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC11.76□□□□□ -0.53
CD40P25942 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
CD40P25942 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.76□□□□□ -0.53
CD40P25942 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC11.76□□□□□ -0.53
CD40P25942 MANEA-AS1-201ENST00000564541 2268 ntBASIC11.76□□□□□ -0.53
CD40P25942 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.76□□□□□ -0.53
CD40P25942 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.76□□□□□ -0.53
CD40P25942 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
CD40P25942 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
CD40P25942 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC11.76□□□□□ -0.53
CD40P25942 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC11.75□□□□□ -0.53
CD40P25942 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC11.75□□□□□ -0.53
CD40P25942 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.75□□□□□ -0.53
CD40P25942 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.75□□□□□ -0.53
CD40P25942 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC11.75□□□□□ -0.53
CD40P25942 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CD40P25942 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC11.75□□□□□ -0.53
CD40P25942 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC11.75□□□□□ -0.53
CD40P25942 KRT17P4-201ENST00000429445 819 ntBASIC11.75□□□□□ -0.53
CD40P25942 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC11.75□□□□□ -0.53
CD40P25942 AC092810.2-201ENST00000431570 362 ntBASIC11.75□□□□□ -0.53
CD40P25942 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC11.75□□□□□ -0.53
CD40P25942 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC11.75□□□□□ -0.53
CD40P25942 NSD1-211ENST00000511258 809 ntTSL 3 BASIC11.75□□□□□ -0.53
CD40P25942 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC11.75□□□□□ -0.53
CD40P25942 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC11.75□□□□□ -0.53
CD40P25942 PIGCP1-201ENST00000527583 895 ntBASIC11.75□□□□□ -0.53
CD40P25942 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC11.75□□□□□ -0.53
CD40P25942 F11R-204ENST00000537746 1245 ntTSL 2 BASIC11.75□□□□□ -0.53
CD40P25942 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC11.75□□□□□ -0.53
CD40P25942 AP005212.2-201ENST00000584979 510 ntBASIC11.75□□□□□ -0.53
CD40P25942 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC11.75□□□□□ -0.53
CD40P25942 HMGB1P24-201ENST00000611897 328 ntBASIC11.75□□□□□ -0.53
CD40P25942 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC11.75□□□□□ -0.53
CD40P25942 AC244250.3-201ENST00000620749 366 ntBASIC11.75□□□□□ -0.53
CD40P25942 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CD40P25942 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC11.75□□□□□ -0.53
CD40P25942 AP000769.1-203ENST00000637245 208 ntBASIC11.75□□□□□ -0.53
CD40P25942 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
CD40P25942 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
CD40P25942 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
CD40P25942 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CD40P25942 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CD40P25942 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC11.75□□□□□ -0.53
CD40P25942 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 CROT-203ENST00000419147 2959 ntTSL 2 BASIC11.75□□□□□ -0.53
CD40P25942 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
CD40P25942 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC11.75□□□□□ -0.53
CD40P25942 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
CD40P25942 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC11.75□□□□□ -0.53
CD40P25942 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC11.75□□□□□ -0.53
CD40P25942 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CD40P25942 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC11.74□□□□□ -0.53
CD40P25942 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CD40P25942 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms