Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
HLA-DRB4X5D2U9 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 PPP1R2P4-201ENST00000424051 595 ntBASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 PDIA3P2-201ENST00000428073 158 ntBASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 AC026320.2-201ENST00000434379 478 ntBASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 AC005077.2-201ENST00000449786 690 ntBASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 AC012618.1-201ENST00000461223 412 ntBASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 ADM-202ENST00000524948 584 ntTSL 2 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 MIR4754-201ENST00000582477 89 ntBASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 NAT9-220ENST00000582870 896 ntTSL 5 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 GPR182-203ENST00000622922 591 ntBASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 SARS-202ENST00000369923 1882 ntTSL 5 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 FAM90A2P-201ENST00000511144 1395 ntBASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 FAM90A25P-201ENST00000528404 1395 ntBASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC10.38□□□□□ -0.75
HLA-DRB4X5D2U9 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 AC020917.4-201ENST00000623994 1999 ntBASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 AL359845.1-201ENST00000458202 1648 ntBASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
HLA-DRB4X5D2U9 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms