Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 NAA40-205ENST00000539656 577 ntTSL 4 BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 TRMT112P3-201ENST00000580149 358 ntBASIC13.52□□□□□ -0.25
SATB2Q9UPW6 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 AP005264.5-201ENST00000590066 467 ntBASIC13.52□□□□□ -0.25
SATB2Q9UPW6 AC006483.2-201ENST00000609813 515 ntBASIC13.52□□□□□ -0.25
SATB2Q9UPW6 AL359091.4-201ENST00000610052 409 ntBASIC13.52□□□□□ -0.25
SATB2Q9UPW6 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 AC004899.2-201ENST00000622993 3860 ntBASIC13.52□□□□□ -0.25
SATB2Q9UPW6 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SATB2Q9UPW6 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 SURF4-203ENST00000371991 715 ntTSL 3 BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 RN7SL375P-201ENST00000492442 298 ntBASIC13.51□□□□□ -0.25
SATB2Q9UPW6 KLF17P1-201ENST00000547105 1126 ntBASIC13.51□□□□□ -0.25
SATB2Q9UPW6 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 EIF5AP2-201ENST00000585668 1047 ntBASIC13.51□□□□□ -0.25
SATB2Q9UPW6 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SATB2Q9UPW6 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SATB2Q9UPW6 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SATB2Q9UPW6 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.5□□□□□ -0.25
SATB2Q9UPW6 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.5□□□□□ -0.25
SATB2Q9UPW6 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SATB2Q9UPW6 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
SATB2Q9UPW6 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SATB2Q9UPW6 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SATB2Q9UPW6 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.5□□□□□ -0.25
SATB2Q9UPW6 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SATB2Q9UPW6 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SATB2Q9UPW6 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SATB2Q9UPW6 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SATB2Q9UPW6 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SATB2Q9UPW6 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
SATB2Q9UPW6 AC015909.5-201ENST00000624336 2266 ntBASIC13.5□□□□□ -0.25
SATB2Q9UPW6 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SATB2Q9UPW6 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SATB2Q9UPW6 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SATB2Q9UPW6 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms