Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC13.25□□□□□ -0.29
LYSMD4Q5XG99 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 DLX4-206ENST00000611342 1662 ntBASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 ATF4P4-201ENST00000393544 1930 ntBASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 AC024475.2-201ENST00000312173 879 ntBASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 SNORA30.1-201ENST00000363193 129 ntBASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 RNA5SP84-201ENST00000364740 107 ntBASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 MARCKSL1P2-201ENST00000401037 976 ntBASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 AP001331.1-201ENST00000413008 1015 ntBASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 AC093106.1-201ENST00000437271 352 ntBASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 BICD1P1-201ENST00000457832 1222 ntBASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 AC010395.2-201ENST00000509899 904 ntBASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 NAA38-204ENST00000575208 529 ntTSL 3 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 AL031768.1-201ENST00000606542 701 ntBASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 AC211476.2-201ENST00000608799 708 ntBASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 AP000553.2-201ENST00000609038 441 ntBASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 AL031590.1-202ENST00000641466 1737 ntBASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LYSMD4Q5XG99 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 MARK2P9-201ENST00000430958 1727 ntBASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 CACYBPP3-201ENST00000406011 625 ntBASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 RPSAP61-201ENST00000412542 878 ntBASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 AL450346.2-201ENST00000495602 1024 ntBASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC13.23□□□□□ -0.29
LYSMD4Q5XG99 AP001120.3-201ENST00000585729 489 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms