Protein–RNA interactions for Protein: P48960

CD97, CD97 antigen, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD97P48960 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.3□□□□□ -0.28
CD97P48960 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD97P48960 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CD97P48960 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD97P48960 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CD97P48960 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CD97P48960 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CD97P48960 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CD97P48960 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CD97P48960 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CD97P48960 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
CD97P48960 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CD97P48960 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.29□□□□□ -0.28
CD97P48960 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC13.29□□□□□ -0.28
CD97P48960 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
CD97P48960 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 AL354702.1-201ENST00000442006 1960 ntBASIC13.29□□□□□ -0.28
CD97P48960 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CD97P48960 HIST2H2BA-201ENST00000412169 381 ntBASIC13.29□□□□□ -0.28
CD97P48960 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC13.29□□□□□ -0.28
CD97P48960 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC13.29□□□□□ -0.28
CD97P48960 AGPAT5P1-201ENST00000455855 1019 ntBASIC13.29□□□□□ -0.28
CD97P48960 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC13.29□□□□□ -0.28
CD97P48960 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.29□□□□□ -0.28
CD97P48960 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.29□□□□□ -0.28
CD97P48960 AC027237.1-201ENST00000560942 655 ntBASIC13.29□□□□□ -0.28
CD97P48960 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC13.29□□□□□ -0.28
CD97P48960 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC13.29□□□□□ -0.28
CD97P48960 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC13.29□□□□□ -0.28
CD97P48960 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.29□□□□□ -0.28
CD97P48960 AP001184.1-201ENST00000637936 376 ntBASIC13.29□□□□□ -0.28
CD97P48960 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CD97P48960 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC13.29□□□□□ -0.28
CD97P48960 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CD97P48960 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.29□□□□□ -0.28
CD97P48960 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 AC090505.1-201ENST00000430515 1834 ntBASIC13.29□□□□□ -0.28
CD97P48960 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.29□□□□□ -0.28
CD97P48960 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.29□□□□□ -0.28
CD97P48960 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.29□□□□□ -0.28
CD97P48960 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CD97P48960 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CD97P48960 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD97P48960 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.28□□□□□ -0.28
CD97P48960 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
CD97P48960 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD97P48960 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD97P48960 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CD97P48960 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.28□□□□□ -0.28
CD97P48960 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD97P48960 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.28□□□□□ -0.28
CD97P48960 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC13.28□□□□□ -0.28
CD97P48960 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD97P48960 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD97P48960 PER1-202ENST00000354903 3115 ntTSL 2 BASIC13.28□□□□□ -0.28
CD97P48960 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC13.28□□□□□ -0.28
CD97P48960 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CD97P48960 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC13.28□□□□□ -0.28
CD97P48960 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.28□□□□□ -0.28
CD97P48960 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC13.28□□□□□ -0.28
CD97P48960 DUX4L50-201ENST00000455245 715 ntBASIC13.28□□□□□ -0.28
CD97P48960 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.28□□□□□ -0.28
CD97P48960 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC13.28□□□□□ -0.28
CD97P48960 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC13.28□□□□□ -0.28
CD97P48960 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.28□□□□□ -0.28
CD97P48960 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC13.28□□□□□ -0.28
CD97P48960 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC13.28□□□□□ -0.28
CD97P48960 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC13.28□□□□□ -0.28
CD97P48960 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.28□□□□□ -0.28
CD97P48960 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CD97P48960 AC107464.3-201ENST00000609172 737 ntBASIC13.28□□□□□ -0.28
CD97P48960 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD97P48960 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.28□□□□□ -0.28
CD97P48960 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CD97P48960 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms