Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 AC009108.4-201ENST00000623284 2451 ntBASIC12.25□□□□□ -0.45
APOA1P02647 DCT-201ENST00000377028 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOA1P02647 THBS1-201ENST00000260356 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 WASF2-202ENST00000618852 5676 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 NRP1-201ENST00000265371 5882 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
APOA1P02647 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC12.24□□□□□ -0.45
APOA1P02647 NFXL1-202ENST00000381538 3728 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
APOA1P02647 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC12.24□□□□□ -0.45
APOA1P02647 GMFB-201ENST00000358056 4301 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC12.24□□□□□ -0.45
APOA1P02647 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
APOA1P02647 NSD3-202ENST00000317025 10776 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
APOA1P02647 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 SHOX-203ENST00000381578 3757 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
APOA1P02647 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC12.24□□□□□ -0.45
APOA1P02647 CICP18-201ENST00000406017 2812 ntBASIC12.24□□□□□ -0.45
APOA1P02647 AC254562.1-201ENST00000417586 456 ntBASIC12.24□□□□□ -0.45
APOA1P02647 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.24□□□□□ -0.45
APOA1P02647 AL162615.1-201ENST00000429893 1653 ntBASIC12.24□□□□□ -0.45
APOA1P02647 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.24□□□□□ -0.45
APOA1P02647 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
APOA1P02647 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
APOA1P02647 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.24□□□□□ -0.45
APOA1P02647 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.24□□□□□ -0.45
APOA1P02647 AC104794.3-201ENST00000566840 1248 ntBASIC12.24□□□□□ -0.45
APOA1P02647 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
APOA1P02647 MIR3687-2-201ENST00000577708 61 ntBASIC12.24□□□□□ -0.45
APOA1P02647 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.24□□□□□ -0.45
APOA1P02647 AC015911.4-201ENST00000588022 1070 ntBASIC12.24□□□□□ -0.45
APOA1P02647 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.24□□□□□ -0.45
APOA1P02647 CEP63-215ENST00000606977 2800 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
APOA1P02647 AC021016.3-201ENST00000608367 477 ntBASIC12.24□□□□□ -0.45
APOA1P02647 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
APOA1P02647 MIR3687-1-201ENST00000614492 61 ntBASIC12.24□□□□□ -0.45
APOA1P02647 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.24□□□□□ -0.45
APOA1P02647 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC12.24□□□□□ -0.45
APOA1P02647 NFASC-206ENST00000404076 5728 ntTSL 5 BASIC12.24□□□□□ -0.45
APOA1P02647 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 IL18BP-209ENST00000497194 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOA1P02647 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.24□□□□□ -0.45
APOA1P02647 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 COL9A1-202ENST00000357250 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 ASTN1-203ENST00000367657 4187 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.23□□□□□ -0.45
APOA1P02647 AC008158.1-201ENST00000578759 3668 ntBASIC12.23□□□□□ -0.45
APOA1P02647 AC007614.4-201ENST00000564048 1827 ntBASIC12.23□□□□□ -0.45
APOA1P02647 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC12.23□□□□□ -0.45
APOA1P02647 ANXA11-205ENST00000438331 6965 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
APOA1P02647 MEGF8-203ENST00000378073 11034 ntTSL 5 BASIC12.23□□□□□ -0.45
APOA1P02647 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
APOA1P02647 RCHY1-201ENST00000324439 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 ULK4-201ENST00000301831 4613 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
APOA1P02647 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC12.23□□□□□ -0.45
APOA1P02647 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC12.23□□□□□ -0.45
APOA1P02647 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
APOA1P02647 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.23□□□□□ -0.45
APOA1P02647 KCNAB2-201ENST00000164247 4273 ntAPPRIS P4 TSL 2 BASIC12.23□□□□□ -0.45
APOA1P02647 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 AL357054.4-201ENST00000606285 2814 ntBASIC12.23□□□□□ -0.45
APOA1P02647 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.23□□□□□ -0.45
APOA1P02647 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
APOA1P02647 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
APOA1P02647 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOA1P02647 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
APOA1P02647 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms