Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.1□□□□□ -0.47
AP3S1Q92572 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.1□□□□□ -0.47
AP3S1Q92572 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.1□□□□□ -0.47
AP3S1Q92572 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.1□□□□□ -0.47
AP3S1Q92572 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S1Q92572 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S1Q92572 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S1Q92572 AC010536.1-201ENST00000538868 2611 ntBASIC12.1□□□□□ -0.47
AP3S1Q92572 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S1Q92572 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
AP3S1Q92572 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S1Q92572 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC12.1□□□□□ -0.47
AP3S1Q92572 DDO-201ENST00000368923 1953 ntTSL 2 BASIC12.1□□□□□ -0.47
AP3S1Q92572 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC12.1□□□□□ -0.47
AP3S1Q92572 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S1Q92572 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC12.1□□□□□ -0.47
AP3S1Q92572 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.1□□□□□ -0.47
AP3S1Q92572 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC12.1□□□□□ -0.47
AP3S1Q92572 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
AP3S1Q92572 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC12.1□□□□□ -0.47
AP3S1Q92572 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.1□□□□□ -0.47
AP3S1Q92572 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
AP3S1Q92572 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.1□□□□□ -0.47
AP3S1Q92572 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
AP3S1Q92572 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S1Q92572 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
AP3S1Q92572 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
AP3S1Q92572 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.1□□□□□ -0.47
AP3S1Q92572 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC12.1□□□□□ -0.47
AP3S1Q92572 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
AP3S1Q92572 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.09□□□□□ -0.47
AP3S1Q92572 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC12.09□□□□□ -0.47
AP3S1Q92572 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S1Q92572 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
AP3S1Q92572 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S1Q92572 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC12.09□□□□□ -0.47
AP3S1Q92572 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
AP3S1Q92572 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S1Q92572 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S1Q92572 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.09□□□□□ -0.47
AP3S1Q92572 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S1Q92572 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC12.09□□□□□ -0.47
AP3S1Q92572 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S1Q92572 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S1Q92572 AC006144.1-201ENST00000424220 1600 ntBASIC12.09□□□□□ -0.47
AP3S1Q92572 KLLN-201ENST00000445946 4277 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
AP3S1Q92572 AMACR-201ENST00000335606 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S1Q92572 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
AP3S1Q92572 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
AP3S1Q92572 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
AP3S1Q92572 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S1Q92572 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S1Q92572 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S1Q92572 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S1Q92572 NBPF17P-201ENST00000401087 2119 ntBASIC12.09□□□□□ -0.47
AP3S1Q92572 AL136309.1-201ENST00000403917 691 ntBASIC12.09□□□□□ -0.47
AP3S1Q92572 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.09□□□□□ -0.47
AP3S1Q92572 FAM8A4P-201ENST00000435433 1213 ntBASIC12.09□□□□□ -0.47
AP3S1Q92572 AL645933.1-201ENST00000440087 609 ntBASIC12.09□□□□□ -0.47
AP3S1Q92572 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.09□□□□□ -0.47
AP3S1Q92572 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.09□□□□□ -0.47
AP3S1Q92572 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.09□□□□□ -0.47
AP3S1Q92572 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S1Q92572 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S1Q92572 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.09□□□□□ -0.47
AP3S1Q92572 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.09□□□□□ -0.47
AP3S1Q92572 AC004790.1-201ENST00000612686 536 ntBASIC12.09□□□□□ -0.47
AP3S1Q92572 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.09□□□□□ -0.47
AP3S1Q92572 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.09□□□□□ -0.47
AP3S1Q92572 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S1Q92572 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S1Q92572 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC12.09□□□□□ -0.47
AP3S1Q92572 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S1Q92572 AC245140.2-201ENST00000624054 1939 ntBASIC12.09□□□□□ -0.47
AP3S1Q92572 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
AP3S1Q92572 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC12.09□□□□□ -0.47
AP3S1Q92572 INPP5D-204ENST00000445964 4845 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S1Q92572 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S1Q92572 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.09□□□□□ -0.47
AP3S1Q92572 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
AP3S1Q92572 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
AP3S1Q92572 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC12.08□□□□□ -0.47
AP3S1Q92572 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC12.08□□□□□ -0.47
AP3S1Q92572 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC12.08□□□□□ -0.48
AP3S1Q92572 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S1Q92572 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S1Q92572 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S1Q92572 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S1Q92572 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
AP3S1Q92572 ZC2HC1C-203ENST00000524913 4283 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
AP3S1Q92572 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S1Q92572 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S1Q92572 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
AP3S1Q92572 ACTN2-201ENST00000366578 4863 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S1Q92572 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC12.08□□□□□ -0.48
AP3S1Q92572 AL138709.1-201ENST00000614840 1693 ntBASIC12.08□□□□□ -0.48
AP3S1Q92572 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S1Q92572 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
AP3S1Q92572 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.08□□□□□ -0.48
AP3S1Q92572 AL157407.1-201ENST00000435784 904 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms