Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 HLA-J-204ENST00000495278 958 ntBASIC12.27□□□□□ -0.45
LRRC28Q86X40 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LRRC28Q86X40 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LRRC28Q86X40 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 AL160314.3-201ENST00000556041 767 ntBASIC12.27□□□□□ -0.45
LRRC28Q86X40 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 AC013355.1-201ENST00000562625 723 ntBASIC12.27□□□□□ -0.45
LRRC28Q86X40 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 AC005962.1-201ENST00000584100 773 ntBASIC12.27□□□□□ -0.45
LRRC28Q86X40 AC008805.1-201ENST00000590892 364 ntBASIC12.27□□□□□ -0.45
LRRC28Q86X40 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 AL139099.5-201ENST00000635274 300 ntBASIC12.27□□□□□ -0.45
LRRC28Q86X40 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LRRC28Q86X40 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
LRRC28Q86X40 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LRRC28Q86X40 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LRRC28Q86X40 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LRRC28Q86X40 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LRRC28Q86X40 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LRRC28Q86X40 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LRRC28Q86X40 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LRRC28Q86X40 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LRRC28Q86X40 LAP3P2-201ENST00000454686 1454 ntBASIC12.27□□□□□ -0.45
LRRC28Q86X40 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LRRC28Q86X40 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LRRC28Q86X40 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
LRRC28Q86X40 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 AC092028.1-202ENST00000641483 3547 ntBASIC12.26□□□□□ -0.45
LRRC28Q86X40 AC092028.1-201ENST00000641781 3540 ntBASIC12.26□□□□□ -0.45
LRRC28Q86X40 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 VDAC1P1-201ENST00000439229 848 ntBASIC12.26□□□□□ -0.45
LRRC28Q86X40 AL645933.1-201ENST00000440087 609 ntBASIC12.26□□□□□ -0.45
LRRC28Q86X40 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 MARK2P5-201ENST00000507649 634 ntBASIC12.26□□□□□ -0.45
LRRC28Q86X40 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 RBM8B-201ENST00000555532 525 ntBASIC12.26□□□□□ -0.45
LRRC28Q86X40 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 SNORD3B-2-202ENST00000571722 791 ntBASIC12.26□□□□□ -0.45
LRRC28Q86X40 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 NDUFV2P1-201ENST00000596415 907 ntBASIC12.26□□□□□ -0.45
LRRC28Q86X40 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 AC100757.4-201ENST00000626934 759 ntBASIC12.26□□□□□ -0.45
LRRC28Q86X40 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC12.26□□□□□ -0.45
LRRC28Q86X40 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LRRC28Q86X40 TUBBP5-203ENST00000508529 1334 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms