Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDC42BPAQ5VT25 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 C2orf27AP2-201ENST00000438438 555 ntBASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 AL353803.1-201ENST00000439014 800 ntTSL 2 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 HNRNPA1P72-201ENST00000529511 967 ntBASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 AL139317.2-201ENST00000556998 158 ntBASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 DNASE1L3-207ENST00000486455 1321 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 PKMP1-201ENST00000455804 1523 ntBASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 DDC-206ENST00000431062 1620 ntTSL 5 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 SCHIP1-201ENST00000445224 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 AL109615.2-201ENST00000455005 1608 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 GPHN-202ENST00000459628 1723 ntTSL 2 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 BEND3P3-201ENST00000611030 2440 ntBASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 AC100774.1-201ENST00000565581 1603 ntBASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 THYN1-202ENST00000352327 835 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 TOMM5-202ENST00000377773 808 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 AC012066.1-201ENST00000439252 694 ntBASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 PIEZO1P1-201ENST00000485427 219 ntBASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 EXTL3-AS1-204ENST00000523789 543 ntTSL 2 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 TMEM253-206ENST00000556585 1236 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 RN7SL827P-201ENST00000607480 288 ntBASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CDC42BPAQ5VT25 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 AC139491.6-202ENST00000637171 2077 ntBASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 CEP70-208ENST00000474781 2028 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 ZDHHC4-202ENST00000396706 1942 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 HACD3-207ENST00000566074 1658 ntTSL 5 BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 FAM95B1-211ENST00000592053 1541 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 AL669942.1-203ENST00000610972 1541 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 CNMD-201ENST00000377962 1410 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 AC026748.1-201ENST00000624349 3251 ntBASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 AC046143.1-201ENST00000447139 972 ntTSL 2 BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 AL445250.1-201ENST00000641671 2259 ntBASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 PAX6-217ENST00000481563 1587 ntTSL 5 BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC19.78■□□□□ 0.76
CDC42BPAQ5VT25 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 SERPINA1-220ENST00000636712 1485 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 LINC02140-202ENST00000566649 2017 ntTSL 2 BASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 FAM90A27P-201ENST00000593323 1370 ntBASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 FAM90A28P-202ENST00000597191 1374 ntBASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 C16orf46-202ENST00000378611 1857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CDC42BPAQ5VT25 PRY-201ENST00000303728 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms