Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 MPV17-209ENST00000405983 859 ntTSL 5 BASIC18.42■□□□□ 0.54
CGNL1Q0VF96 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC18.42■□□□□ 0.54
CGNL1Q0VF96 NME6-208ENST00000435684 599 ntTSL 2 BASIC18.42■□□□□ 0.54
CGNL1Q0VF96 NRADDP-201ENST00000437305 691 ntBASIC18.42■□□□□ 0.54
CGNL1Q0VF96 RPL3P5-201ENST00000441645 1232 ntBASIC18.42■□□□□ 0.54
CGNL1Q0VF96 AC015818.1-201ENST00000451011 244 ntBASIC18.42■□□□□ 0.54
CGNL1Q0VF96 AC112250.1-201ENST00000504640 745 ntBASIC18.42■□□□□ 0.54
CGNL1Q0VF96 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC18.42■□□□□ 0.54
CGNL1Q0VF96 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC18.42■□□□□ 0.54
CGNL1Q0VF96 AP000920.1-201ENST00000531824 344 ntBASIC18.42■□□□□ 0.54
CGNL1Q0VF96 KNOP1P1-201ENST00000542108 989 ntBASIC18.42■□□□□ 0.54
CGNL1Q0VF96 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CGNL1Q0VF96 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC18.42■□□□□ 0.54
CGNL1Q0VF96 MEIS2-215ENST00000559561 1442 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
CGNL1Q0VF96 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CGNL1Q0VF96 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CGNL1Q0VF96 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CGNL1Q0VF96 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 AL929302.1-201ENST00000426556 871 ntBASIC18.41■□□□□ 0.54
CGNL1Q0VF96 RPSAP12-201ENST00000435879 888 ntBASIC18.41■□□□□ 0.54
CGNL1Q0VF96 NDUFB2P1-201ENST00000506966 295 ntBASIC18.41■□□□□ 0.54
CGNL1Q0VF96 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 AC078814.4-201ENST00000546650 327 ntBASIC18.41■□□□□ 0.54
CGNL1Q0VF96 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 MEP1AP1-201ENST00000636082 1097 ntBASIC18.41■□□□□ 0.54
CGNL1Q0VF96 AC012358.2-201ENST00000430010 1434 ntBASIC18.41■□□□□ 0.54
CGNL1Q0VF96 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CGNL1Q0VF96 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 APP-205ENST00000358918 2366 ntTSL 5 BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 SDCBP2P1-201ENST00000416115 614 ntBASIC18.4■□□□□ 0.54
CGNL1Q0VF96 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 CASP3-205ENST00000517513 964 ntTSL 5 BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 AC023968.2-201ENST00000560593 1049 ntBASIC18.4■□□□□ 0.54
CGNL1Q0VF96 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CGNL1Q0VF96 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC18.39■□□□□ 0.54
CGNL1Q0VF96 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CGNL1Q0VF96 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
CGNL1Q0VF96 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CGNL1Q0VF96 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CGNL1Q0VF96 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms