Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC14.71□□□□□ -0.05
SSR1P43307 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 AC093462.1-201ENST00000621167 1683 ntBASIC14.71□□□□□ -0.05
SSR1P43307 PCDHB18P-202ENST00000526308 3197 ntBASIC14.71□□□□□ -0.05
SSR1P43307 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC14.71□□□□□ -0.05
SSR1P43307 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.71□□□□□ -0.05
SSR1P43307 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 RN7SKP214-201ENST00000364208 315 ntBASIC14.71□□□□□ -0.05
SSR1P43307 OR8T1P-201ENST00000421347 918 ntBASIC14.71□□□□□ -0.05
SSR1P43307 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
SSR1P43307 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.71□□□□□ -0.05
SSR1P43307 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.71□□□□□ -0.05
SSR1P43307 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.71□□□□□ -0.05
SSR1P43307 AC125604.1-201ENST00000496255 707 ntBASIC14.71□□□□□ -0.05
SSR1P43307 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.71□□□□□ -0.05
SSR1P43307 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.71□□□□□ -0.05
SSR1P43307 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.71□□□□□ -0.05
SSR1P43307 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.71□□□□□ -0.05
SSR1P43307 AL451050.2-201ENST00000606967 682 ntBASIC14.71□□□□□ -0.05
SSR1P43307 AL008721.1-201ENST00000609964 604 ntBASIC14.71□□□□□ -0.05
SSR1P43307 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.71□□□□□ -0.05
SSR1P43307 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.71□□□□□ -0.05
SSR1P43307 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
SSR1P43307 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SSR1P43307 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SSR1P43307 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SSR1P43307 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.06
SSR1P43307 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
SSR1P43307 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.71□□□□□ -0.06
SSR1P43307 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.71□□□□□ -0.06
SSR1P43307 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
SSR1P43307 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.71□□□□□ -0.06
SSR1P43307 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SSR1P43307 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC14.71□□□□□ -0.06
SSR1P43307 AC020917.4-201ENST00000623994 1999 ntBASIC14.71□□□□□ -0.06
SSR1P43307 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SSR1P43307 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SSR1P43307 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SSR1P43307 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SSR1P43307 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SSR1P43307 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC14.7□□□□□ -0.06
SSR1P43307 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.7□□□□□ -0.06
SSR1P43307 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.7□□□□□ -0.06
SSR1P43307 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 AC020763.3-201ENST00000625095 2904 ntBASIC14.7□□□□□ -0.06
SSR1P43307 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.7□□□□□ -0.06
SSR1P43307 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SSR1P43307 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SSR1P43307 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.7□□□□□ -0.06
SSR1P43307 MARK2P16-201ENST00000605714 1723 ntBASIC14.7□□□□□ -0.06
SSR1P43307 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC14.7□□□□□ -0.06
SSR1P43307 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.7□□□□□ -0.06
SSR1P43307 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 AC005740.1-201ENST00000515639 522 ntBASIC14.7□□□□□ -0.06
SSR1P43307 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.7□□□□□ -0.06
SSR1P43307 AL022328.3-201ENST00000607943 679 ntBASIC14.7□□□□□ -0.06
SSR1P43307 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.7□□□□□ -0.06
SSR1P43307 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.7□□□□□ -0.06
SSR1P43307 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC14.7□□□□□ -0.06
SSR1P43307 AL645937.6-201ENST00000641122 3727 ntBASIC14.7□□□□□ -0.06
SSR1P43307 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 AL358781.1-202ENST00000321081 1360 ntBASIC14.7□□□□□ -0.06
SSR1P43307 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SSR1P43307 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSR1P43307 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms